RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 FUT2Q10981 343 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 UBE2SQ16763 222 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 CCDC62Q6P9F0 684 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 LARP6Q9BRS8 491 aaKnown RBP16.95■□□□□ 0.3
ATG4B-224ENST00000494132 UPF3BQ9BZI7 483 aaKnown RBP16.95■□□□□ 0.3
ATG4B-224ENST00000494132 MRVI1Q9Y6F6 885 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 MEIS2O14770 477 aa16.94■□□□□ 0.3
ATG4B-224ENST00000494132 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.3
ATG4B-224ENST00000494132 EIF3JO75822 258 aaKnown RBP16.94■□□□□ 0.3
ATG4B-224ENST00000494132 ADD1P35611 737 aaKnown RBP16.94■□□□□ 0.3
ATG4B-224ENST00000494132 CPT1AP50416 773 aa16.94■□□□□ 0.3
ATG4B-224ENST00000494132 FXR1P51114 621 aaKnown RBP eCLIP16.94■□□□□ 0.3
ATG4B-224ENST00000494132 WWC2Q6AWC2 1192 aa16.94■□□□□ 0.3
ATG4B-224ENST00000494132 TYW1BQ6NUM6 668 aa16.94■□□□□ 0.3
ATG4B-224ENST00000494132 BADQ92934 168 aa16.94■□□□□ 0.3
ATG4B-224ENST00000494132 CUL5Q93034 780 aa16.94■□□□□ 0.3
ATG4B-224ENST00000494132 LBHD1Q9BQE6 289 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-224ENST00000494132 TMEM39AQ9NV64 488 aa16.94■□□□□ 0.3
ATG4B-224ENST00000494132 V9GY48 417 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-224ENST00000494132 GRIN2DO15399 1336 aa16.94■□□□□ 0.3
ATG4B-224ENST00000494132 DCDC2CA8MYV0 355 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 GH1P01241 217 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 CCND2P30279 289 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 CDK7P50613 346 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 CHMP4BP1P59074 171 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 PURAQ00577 322 aaKnown RBP16.93■□□□□ 0.3
ATG4B-224ENST00000494132 ARHGAP1Q07960 439 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 ITGA7Q13683 1181 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 RUFY3Q7L099 469 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 VSIG10LQ86VR7 867 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 SAMD3Q8N6K7 520 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 AFG1LQ8WV93 481 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 PSTPIP2Q9H939 334 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 RTEL1Q9NZ71 1219 aa16.93■□□□□ 0.3
ATG4B-224ENST00000494132 DDX41Q9UJV9 622 aaKnown RBP16.93■□□□□ 0.3
ATG4B-224ENST00000494132 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 EPB41L2O43491 1005 aaKnown RBP16.92■□□□□ 0.3
ATG4B-224ENST00000494132 BMP8BP34820 402 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 CCT2P78371 535 aaKnown RBP16.92■□□□□ 0.3
ATG4B-224ENST00000494132 MRPS9P82933 396 aaKnown RBP16.92■□□□□ 0.3
ATG4B-224ENST00000494132 TOB2Q14106 344 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-224ENST00000494132 FAM126BQ8IXS8 530 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 PGBD1Q96JS3 809 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 PPP1R12CQ9BZL4 782 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 POLR3EQ9NVU0 708 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 FRMPD4Q14CM0 1322 aa16.92■□□□□ 0.3
ATG4B-224ENST00000494132 SOX1O00570 391 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-224ENST00000494132 CABYRO75952 493 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 MMP3P08254 477 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 RAG1P15918 1043 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 NAPAP54920 295 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 PHKBQ93100 1093 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 TOX2Q96NM4 488 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 MTG1Q9BT17 334 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-224ENST00000494132 AGXT2Q9BYV1 514 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 BCAS3Q9H6U6 928 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 NCOA5Q9HCD5 579 aaKnown RBP16.91■□□□□ 0.3
ATG4B-224ENST00000494132 MROH7Q68CQ1 1323 aa16.91■□□□□ 0.3
ATG4B-224ENST00000494132 A6NJR5 290 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 STXBP3O00186 592 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 PIK3CDO00329 1044 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 KIAA0355O15063 1070 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 UBA1P22314 1058 aaKnown RBP16.9■□□□□ 0.3
ATG4B-224ENST00000494132 RCAN1P53805 252 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 SP2Q02086 613 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 BRDTQ58F21 947 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-224ENST00000494132 FAM47CQ5HY64 1035 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 TDHQ8IZJ6 230 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 SLC43A3Q8NBI5 491 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 TRPV6Q9H1D0 765 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 TBX21Q9UL17 535 aa16.9■□□□□ 0.3
ATG4B-224ENST00000494132 KAT6AQ92794 2004 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 TLR3O15455 904 aaKnown RBP16.89■□□□□ 0.29
ATG4B-224ENST00000494132 B4GALT4O60513 344 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 SEC24BO95487 1268 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 GGPS1O95749 300 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 ZNF286BP0CG31 522 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 PDIA3P30101 505 aaKnown RBP16.89■□□□□ 0.29
ATG4B-224ENST00000494132 STK3Q13188 491 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 C9orf50Q5SZB4 431 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 DHX37Q8IY37 1157 aaKnown RBP16.89■□□□□ 0.29
ATG4B-224ENST00000494132 LRCH3Q96II8 777 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 PDRG1Q9NUG6 133 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 TRMT13Q9NUP7 481 aaKnown RBP16.89■□□□□ 0.29
ATG4B-224ENST00000494132 UMODL1Q5DID0 1318 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 NID2Q14112 1375 aa16.89■□□□□ 0.29
ATG4B-224ENST00000494132 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 A0A1W2PPC1 479 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 SPDYE3A6NKU9 549 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 ADAMTS3O15072 1205 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 CD4P01730 458 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 EPHB4P54760 987 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 NBPF20Q3BBV1 942 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 FBXL16Q8N461 479 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 TM6SF1Q9BZW5 370 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 TMEM260Q9NX78 707 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms