RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	VPS54	Q9P1Q0	977 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	DDX49	Q9Y6V7	483 aa	Known RBP	11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	NKRF	O15226	690 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	MYCN	P04198	464 aa	Predicted RBP	11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	NLRP5	P59047	1200 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	DUSP28	Q4G0W2	176 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	ANO1	Q5XXA6	986 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	GALNT17	Q6IS24	598 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	KCNV1	Q6PIU1	500 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	NSUN7	Q8NE18	718 aa	Known RBP	11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	AP5M1	Q9H0R1	490 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	ORC3	Q9UBD5	711 aa	Predicted RBP	11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	PCDHA6	Q9UN73	950 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012		Q9Y3F1	56 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	PCDHA8	Q9Y5H6	950 aa		11.44	□□□□□ -0.58
MACF1-222	ENST00000494012	MYH7B	A7E2Y1	1941 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	CTDNEP1	O95476	244 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	PGK1	P00558	417 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	C6orf222	P0C671	652 aa	Predicted RBP	11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	TXN	P10599	105 aa	Known RBP	11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	SMPD1	P17405	629 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	CLK2	P49760	499 aa	Known RBP	11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	GJA9	P57773	515 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	LRRC41	Q15345	812 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	SEPT14	Q6ZU15	432 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	NECAB2	Q7Z6G3	386 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	TLK2	Q86UE8	772 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	CCDC83	Q8IWF9	413 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	IL31RA	Q8NI17	732 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	LENG1	Q96BZ8	264 aa	Predicted RBP	11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	UPF3A	Q9H1J1	476 aa	Known RBP	11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	C11orf49	Q9H6J7	331 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	PDGFC	Q9NRA1	345 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	GNE	Q9Y223	722 aa	Known RBP	11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	MRVI1	Q9Y6F6	885 aa		11.43	□□□□□ -0.58
MACF1-222	ENST00000494012	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	MOXD2P	A6NHM9	499 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	ADCY6	O43306	1168 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	ADAMTS4	O75173	837 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	TGFB3	P10600	412 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	CST5	P28325	142 aa	Predicted RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	SREBF1	P36956	1147 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	NKX3-2	P78367	333 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	HMGN5	P82970	282 aa	Known RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	TRIM29	Q14134	588 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	BRDT	Q58F21	947 aa	Predicted RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	GJC2	Q5T442	439 aa	Predicted RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	UBE2Q1	Q7Z7E8	422 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	NLRX1	Q86UT6	975 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	PCSK9	Q8NBP7	692 aa	Known RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	DAGLB	Q8NCG7	672 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	PAWR	Q96IZ0	340 aa	Known RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	CDHR1	Q96JP9	859 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	INPP4A	Q96PE3	977 aa	Predicted RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	TSEN34	Q9BSV6	310 aa	Known RBP	11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	ALG1	Q9BT22	464 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	HTATIP2	Q9BUP3	242 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	ANO3	Q9BYT9	981 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	PCDHA4	Q9UN74	947 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	PDE4DIP	Q5VU43	2346 aa		11.42	□□□□□ -0.58
MACF1-222	ENST00000494012	FIBP	O43427	364 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	ZEB2	O60315	1214 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	GH1	P01241	217 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	COL6A1	P12109	1028 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	CPT1A	P50416	773 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	MRPS9	P82933	396 aa	Known RBP	11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	ST3GAL1	Q11201	340 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	FSCN1	Q16658	493 aa	Known RBP	11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	GNAS	Q5JWF2	1037 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	JAKMIP3	Q5VZ66	844 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	CCDC62	Q6P9F0	684 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	BLID	Q8IZY5	108 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	OR6J1	Q8NGC5	347 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	DIS3L	Q8TF46	1054 aa	Known RBP	11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	GPRASP2	Q96D09	838 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	TMX3	Q96JJ7	454 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	AIFM3	Q96NN9	605 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	PHF20	Q9BVI0	1012 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	BRMS1	Q9HCU9	246 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	TMEM260	Q9NX78	707 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	PHF24	Q9UPV7	400 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	KIF3A	Q9Y496	699 aa		11.41	□□□□□ -0.58
MACF1-222	ENST00000494012	DOCK5	Q9H7D0	1870 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	DYNC1LI2	O43237	492 aa	Predicted RBP	11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	JAK2	O60674	1132 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	RGS20	O76081	388 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	FDPS	P14324	419 aa	Known RBP	11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	ICAM3	P32942	547 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	MNX1	P50219	401 aa	Predicted RBP	11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	ACLY	P53396	1101 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	ARHGAP4	P98171	946 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	MTMR1	Q13613	665 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	PRPF38B	Q5VTL8	546 aa	Known RBP	11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	FAM184A	Q8NB25	1140 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	KLHDC9	Q8NEP7	349 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	EMID1	Q96A84	441 aa	Predicted RBP	11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	DDX41	Q9UJV9	622 aa	Known RBP	11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	ALPK3	Q96L96	1907 aa		11.4	□□□□□ -0.58
MACF1-222	ENST00000494012	MYADML2	A6NDP7	307 aa		11.39	□□□□□ -0.59

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