RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 VTA1Q9NP79 307 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 XPNPEP3Q9NQH7 507 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 WDR81Q562E7 1941 aa13.43□□□□□ -0.26
UBA3-211ENST00000493957 CCDC196A0A1B0GTZ2 297 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 ADAMTS4O75173 837 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 ARIH2O95376 493 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 IFNAR1P17181 557 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 NAPAP54920 295 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 ST3GAL1Q11201 340 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 TRAF1Q13077 416 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 PGM5Q15124 567 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 PPP2R5BQ15173 497 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 ME3Q16798 604 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 PFKFB3Q16875 520 aaPredicted RBP13.42□□□□□ -0.26
UBA3-211ENST00000493957 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 NSUN6Q8TEA1 469 aaKnown RBP13.42□□□□□ -0.26
UBA3-211ENST00000493957 COPS5Q92905 334 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 AIFM3Q96NN9 605 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 PDCD2LQ9BRP1 358 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 MAF1Q9H063 256 aa13.42□□□□□ -0.26
UBA3-211ENST00000493957 FRMPD4Q14CM0 1322 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 LOC102724159A0A0B4J2E5 919 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
UBA3-211ENST00000493957 CTAGE5O15320 804 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 PRPF3O43395 683 aaKnown RBP13.41□□□□□ -0.26
UBA3-211ENST00000493957 PFKFB2O60825 505 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 DUSP11O75319 330 aaKnown RBP13.41□□□□□ -0.26
UBA3-211ENST00000493957 CTDNEP1O95476 244 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 NR3C2P08235 984 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 COL6A1P12109 1028 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 MYCLP12524 364 aaPredicted RBP13.41□□□□□ -0.26
UBA3-211ENST00000493957 SCG2P13521 617 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 TNFAIP2Q03169 654 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 PWP2Q15269 919 aaKnown RBP13.41□□□□□ -0.26
UBA3-211ENST00000493957 SEPT14Q6ZU15 432 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 PGBD1Q96JS3 809 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 C11orf49Q9H6J7 331 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 PSTPIP2Q9H939 334 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 TMEM260Q9NX78 707 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 BARHL2Q9NY43 387 aa13.41□□□□□ -0.26
UBA3-211ENST00000493957 GNEQ9Y223 722 aaKnown RBP13.41□□□□□ -0.26
UBA3-211ENST00000493957 TRIP12Q14669 1992 aaPredicted RBP13.41□□□□□ -0.26
UBA3-211ENST00000493957 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 PIK3CDO00329 1044 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 DNM1LO00429 736 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 RGS20O76081 388 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 BEX3Q00994 111 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 NECAB2Q7Z6G3 386 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 SAMD3Q8N6K7 520 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 FERMT2Q96AC1 680 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 IWS1Q96ST2 819 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 RNF26Q9BY78 433 aaPredicted RBP13.4□□□□□ -0.26
UBA3-211ENST00000493957 WDR11Q9BZH6 1224 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 UPF3AQ9H1J1 476 aaKnown RBP13.4□□□□□ -0.26
UBA3-211ENST00000493957 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
UBA3-211ENST00000493957 MAP3K20Q9NYL2 800 aaKnown RBP13.4□□□□□ -0.26
UBA3-211ENST00000493957 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
UBA3-211ENST00000493957 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 CPLX1O14810 134 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
UBA3-211ENST00000493957 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
UBA3-211ENST00000493957 ADCY7P51828 1080 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 GJA9P57773 515 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 MRPS9P82933 396 aaKnown RBP13.39□□□□□ -0.27
UBA3-211ENST00000493957 ANKRD1Q15327 319 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 STXBP2Q15833 593 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 IQSEC1Q6DN90 963 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
UBA3-211ENST00000493957 PPP1R18Q6NYC8 613 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 TLK2Q86UE8 772 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 VSIG10LQ86VR7 867 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 ARRDC4Q8NCT1 418 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 KLHDC9Q8NEP7 349 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 CUL5Q93034 780 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 RNF166Q96A37 237 aaPredicted RBP13.39□□□□□ -0.27
UBA3-211ENST00000493957 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
UBA3-211ENST00000493957 RIC8AQ9NPQ8 531 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 LTBP2Q14767 1821 aa13.39□□□□□ -0.27
UBA3-211ENST00000493957 KBTBD13C9JR72 458 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
UBA3-211ENST00000493957 SORBS3O60504 671 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 CD2BP2O95400 341 aaKnown RBP13.38□□□□□ -0.27
UBA3-211ENST00000493957 SSRP1Q08945 709 aaKnown RBP13.38□□□□□ -0.27
UBA3-211ENST00000493957 KCNA10Q16322 511 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 LY6KQ17RY6 165 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 LRRC26Q2I0M4 334 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 DUSP28Q4G0W2 176 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 CCDC62Q6P9F0 684 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 RASGRP4Q8TDF6 673 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
UBA3-211ENST00000493957 GJB4Q9NTQ9 266 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 RTEL1Q9NZ71 1219 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 PCDHA6Q9UN73 950 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 PHF24Q9UPV7 400 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 PCDHA8Q9Y5H6 950 aa13.38□□□□□ -0.27
UBA3-211ENST00000493957 B4DLN1 442 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms