RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ANO10Q9NW15 660 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 DACT1Q9NYF0 836 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 DDX41Q9UJV9 622 aaKnown RBP12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 MORC2Q9Y6X9 1032 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 CACNA1HO95180 2353 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 TET1Q8NFU7 2136 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 SNAI1O95863 264 aaPredicted RBP12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 PFKMP08237 780 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 C6orf222P0C671 652 aaPredicted RBP12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 TNNT1P13805 278 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 PTGS1P23219 599 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 SHMT1P34896 483 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 NUBP1P53384 320 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 PTH1RQ03431 593 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 TAP1Q03518 808 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 ST3GAL1Q11201 340 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 G3BP1Q13283 466 aaKnown RBP eCLIP12.11□□□□□ -0.471e-8■■□□□ 12.7
PDLIM1-205ENST00000493949 GRB10Q13322 594 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 TMEM132BQ14DG7 1078 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 LEXMQ3ZCV2 418 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 KIAA1755Q5JYT7 1200 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 DRC7Q8IY82 874 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 CCDC150Q8NCX0 1101 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 PHOSPHO2Q8TCD6 241 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 ZNF830Q96NB3 372 aaPredicted RBP12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 CERS4Q9HA82 394 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 SPC25Q9HBM1 224 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 PIH1D3Q9NQM4 214 aaKnown RBP12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 CLIP2Q9UDT6 1046 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 CTNNA3Q9UI47 895 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
PDLIM1-205ENST00000493949 SIP14410 1827 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 AP5Z1O43299 807 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 ADCY6O43306 1168 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 DCXO43602 365 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 UQCRFS1P1P0C7P4 283 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 COPB2P35606 906 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 CCL23P55773 120 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 TPM4P67936 248 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 RESTQ13127 1097 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 SEPT2Q15019 361 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 NYAP1Q6ZVC0 841 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 FBXL16Q8N461 479 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 MIGA1Q8NAN2 632 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 SMARCC2Q8TAQ2 1214 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 SLC9A7Q96T83 725 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 UBE2ZQ9H832 354 aaPredicted RBP12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 TECTAO75443 2155 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 TANC1Q9C0D5 1861 aa12.1□□□□□ -0.47
PDLIM1-205ENST00000493949 PTPRZ1P23471 2315 aaPredicted RBP12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 FLOT1O75955 427 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 ARHGEF15O94989 841 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 LIG1P18858 919 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 ZAP70P43403 619 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 GABPAQ06546 454 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 ADCK5Q3MIX3 580 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 CCDC73Q6ZRK6 1079 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 AACSQ86V21 672 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 CEP57L1Q8IYX8 460 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 KRT222Q8N1A0 295 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 BICD2Q8TD16 824 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 ARNTL2Q8WYA1 636 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 AGBL1Q96MI9 1066 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 PHOX2BQ99453 314 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 ZNF214Q9UL59 606 aaPredicted RBP12.09□□□□□ -0.47
PDLIM1-205ENST00000493949 MYH7P12883 1935 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 CABYRO75952 493 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 ATP5JP18859 108 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 NMIQ13287 307 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 ACVR2BQ13705 512 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 IQCB1Q15051 598 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 PTPN14Q15678 1187 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 TPD52L1Q16890 204 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 FOXD4L6Q3SYB3 417 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 FOXD4L3Q6VB84 417 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 LUZP1Q86V48 1076 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 CLEC10AQ8IUN9 316 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 LRRC8AQ8IWT6 810 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 MAGEB6Q8N7X4 407 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 KIF18AQ8NI77 898 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms