RNA–Protein interactions for RNA: ENST00000493855.1

CCT6A-208, Transcript of chaperonin containing TCP1 subunit 6A, human

TSL 2

Gene CCT6A, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT6A-208	ENST00000493855	SPOCK3	Q9BQ16	436 aa		4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855	CELF4	Q9BZC1	486 aa	Known RBP	4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855	SEMA6B	Q9H3T3	888 aa		4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855	EPB41L1	Q9H4G0	881 aa		4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855	PCIF1	Q9H4Z3	704 aa		4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855	IPPK	Q9H8X2	491 aa		4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855	COQ6	Q9Y2Z9	468 aa		4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855		U3KQE9	123 aa		4.07	□□□□□ -1.76
CCT6A-208	ENST00000493855	TMEM82	A0PJX8	343 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855		H7C1D1	291 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	MARCH6	O60337	910 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	ULK1	O75385	1050 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	USP2	O75604	605 aa	Predicted RBP	4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	GLRX3	O76003	335 aa	Known RBP	4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	KRT37	O76014	449 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	FUCA1	P04066	466 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	KRT15	P19012	456 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	ARL4A	P40617	200 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	CDKN1C	P49918	316 aa	Predicted RBP	4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	HK2	P52789	917 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	CORO7	P57737	925 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	EVA1C	P58658	441 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	RTP1	P59025	263 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	ITK	Q08881	620 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	FAP	Q12884	760 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	INF2	Q27J81	1249 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	PLEKHG6	Q3KR16	790 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	TMEM177	Q53S58	311 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	NKAPL	Q5M9Q1	402 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	ZPBP2	Q6X784	338 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	NOL8	Q76FK4	1167 aa	Known RBP	4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	C16orf59	Q7L2K0	433 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	CCDC103	Q8IW40	242 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	LZTR1	Q8N653	840 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	NUP43	Q8NFH3	380 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	JDP2	Q8WYK2	163 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	GPR101	Q96P66	508 aa	Predicted RBP	4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	PCGF6	Q9BYE7	350 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	AP5M1	Q9H0R1	490 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	IRF2BPL	Q9H1B7	796 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	SLC5A4	Q9NY91	659 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	KLHL42	Q9P2K6	505 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	GULP1	Q9UBP9	304 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	TMEM59L	Q9UK28	342 aa		4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	G3BP2	Q9UN86	482 aa	Known RBP	4.06	□□□□□ -1.76
CCT6A-208	ENST00000493855	SLC12A8	A0AV02	714 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	FITM1	A5D6W6	292 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	PRR19	A6NJB7	356 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	C22orf46	C9J442	243 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	CBX4	O00257	560 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	MSC	O60682	206 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	CYP4F3	Q08477	520 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	BNIP3	Q12983	259 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	STAT4	Q14765	748 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	ATP13A4	Q4VNC1	1196 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	PRSS36	Q5K4E3	855 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	MROH9	Q5TGP6	573 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	TEX2	Q8IWB9	1127 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	RPUSD2	Q8IZ73	545 aa	Known RBP	4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	NXPE1	Q8N323	547 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	AGBL5	Q8NDL9	886 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	PCDH19	Q8TAB3	1148 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	SMAD5	Q99717	465 aa	Known RBP	4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	PUS7L	Q9H0K6	701 aa	Known RBP	4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	THG1L	Q9NWX6	298 aa	Known RBP	4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	ADGRE2	Q9UHX3	823 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	DBR1	Q9UK59	544 aa	Known RBP	4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	NUDT5	Q9UKK9	219 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	RWDD3	Q9Y3V2	267 aa		4.05	□□□□□ -1.76
CCT6A-208	ENST00000493855	WASHC2A	Q641Q2	1341 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	PTPDC1	A2A3K4	754 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	ZNF891	A8MT65	544 aa	Predicted RBP	4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	GPR39	O43194	453 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	FKBP9	O95302	570 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	F2	P00734	622 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	FPR2	P25090	351 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	HOXA10	P31260	410 aa	Predicted RBP	4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	LSS	P48449	732 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	PLCL1	Q15111	1095 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	GPR19	Q15760	415 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	SEPT7	Q16181	437 aa	Known RBP	4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	MSMP	Q1L6U9	139 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	BRDT	Q58F21	947 aa	Predicted RBP	4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	BICRAL	Q6AI39	1079 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	FKBP9P1	Q75LS8	142 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	STRA8	Q7Z7C7	330 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	DCP2	Q8IU60	420 aa	Known RBP	4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	TP53INP2	Q8IXH6	220 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	NLGN4X	Q8N0W4	816 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	PDZD8	Q8NEN9	1154 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	HHIPL1	Q96JK4	782 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	JMJD8	Q96S16	334 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	BOC	Q9BWV1	1114 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	IMPACT	Q9P2X3	320 aa		4.04	□□□□□ -1.76
CCT6A-208	ENST00000493855	B4GALT6	Q9UBX8	382 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms