RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 COBLO75128 1261 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 TSPY3P0CV98 308 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 TSPY8P0CW00 308 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 CPA1P15085 419 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 ANP32AP39687 249 aaKnown RBP14.15□□□□□ -0.14
UPF3A-210ENST00000493727 KCTD2Q14681 263 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 TMEM132BQ14DG7 1078 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
UPF3A-210ENST00000493727 FAM47AQ5JRC9 791 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 C1orf53Q5VUE5 145 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 DHX32Q7L7V1 743 aaKnown RBP14.15□□□□□ -0.14
UPF3A-210ENST00000493727 PNMA1Q8ND90 353 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 MMP19Q99542 508 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 UBAC1Q9BSL1 405 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 SEMA6BQ9H3T3 888 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 NYAP2Q9P242 653 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 PPP1R9AQ9ULJ8 1098 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 ATP11BQ9Y2G3 1177 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 DIS3Q9Y2L1 958 aaKnown RBP14.15□□□□□ -0.14
UPF3A-210ENST00000493727 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 ERICH2A1L162 156 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 VWA5AO00534 786 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 GFRA3O60609 400 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 FGRP09769 529 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 RASA1P20936 1047 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 VARSP26640 1264 aaKnown RBP14.14□□□□□ -0.15
UPF3A-210ENST00000493727 STAT3P40763 770 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 SMAD3P84022 425 aaKnown RBP14.14□□□□□ -0.15
UPF3A-210ENST00000493727 TFAP4Q01664 338 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 TRIM60Q495X7 471 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 FAM83BQ5T0W9 1011 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 CHST3Q7LGC8 479 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 BPHLQ86WA6 291 aaPredicted RBP14.14□□□□□ -0.15
UPF3A-210ENST00000493727 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 MAFAQ8NHW3 353 aaPredicted RBP14.14□□□□□ -0.15
UPF3A-210ENST00000493727 BADQ92934 168 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 MAML3Q96JK9 1138 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 OCSTAMPQ9BR26 566 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 IRX2Q9BZI1 471 aaPredicted RBP14.14□□□□□ -0.15
UPF3A-210ENST00000493727 TOR4AQ9NXH8 423 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 SYNPO2Q9UMS6 1093 aa14.14□□□□□ -0.15
UPF3A-210ENST00000493727 TRIM43BA6NCK2 446 aa14.13□□□□□ -0.15
UPF3A-210ENST00000493727 ANO1Q5XXA6 986 aa14.13□□□□□ -0.15
UPF3A-210ENST00000493727 CYB5R4Q7L1T6 521 aa14.13□□□□□ -0.15
UPF3A-210ENST00000493727 TRIM43Q96BQ3 446 aaPredicted RBP14.13□□□□□ -0.15
UPF3A-210ENST00000493727 SLF1Q9BQI6 1058 aa14.13□□□□□ -0.15
UPF3A-210ENST00000493727 LRRC2Q9BYS8 371 aa14.13□□□□□ -0.15
UPF3A-210ENST00000493727 WDR19Q8NEZ3 1342 aa14.13□□□□□ -0.15
UPF3A-210ENST00000493727 IFIT3O14879 490 aaKnown RBP14.12□□□□□ -0.15
UPF3A-210ENST00000493727 ANKRD1Q15327 319 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 LRRC41Q15345 812 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 CCDC178Q5BJE1 867 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 TMEM67Q5HYA8 995 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 Q6ZUG5 572 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 NOL8Q76FK4 1167 aaKnown RBP14.12□□□□□ -0.15
UPF3A-210ENST00000493727 HSCBQ8IWL3 235 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 MYLIPQ8WY64 445 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 TMEM87BQ96K49 555 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 ZKSCAN3Q9BRR0 538 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 C1QTNF2Q9BXJ5 285 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 TEX13BQ9BXU2 312 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 PRDM5Q9NQX1 630 aaPredicted RBP14.12□□□□□ -0.15
UPF3A-210ENST00000493727 FBXO28Q9NVF7 368 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 ZNF214Q9UL59 606 aaPredicted RBP14.12□□□□□ -0.15
UPF3A-210ENST00000493727 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
UPF3A-210ENST00000493727 GPSM3Q9Y4H4 160 aa14.12□□□□□ -0.15
UPF3A-210ENST00000493727 CTDP1Q9Y5B0 961 aaPredicted RBP14.12□□□□□ -0.15
UPF3A-210ENST00000493727 TMEM265A0A087WTH1 108 aa14.11□□□□□ -0.15
UPF3A-210ENST00000493727 ITGB8P26012 769 aa14.11□□□□□ -0.15
UPF3A-210ENST00000493727 ANTXR2P58335 489 aa14.11□□□□□ -0.15
UPF3A-210ENST00000493727 WTAPQ15007 396 aa14.11□□□□□ -0.15
UPF3A-210ENST00000493727 NFXL1Q6ZNB6 911 aa14.11□□□□□ -0.15
UPF3A-210ENST00000493727 MSL3Q8N5Y2 521 aaKnown RBP14.11□□□□□ -0.15
UPF3A-210ENST00000493727 PRPF38AQ8NAV1 312 aaKnown RBP14.11□□□□□ -0.15
UPF3A-210ENST00000493727 ZSCAN10Q96SZ4 725 aaPredicted RBP14.11□□□□□ -0.15
UPF3A-210ENST00000493727 TINF2Q9BSI4 451 aa14.11□□□□□ -0.15
UPF3A-210ENST00000493727 NAP1L2Q9ULW6 460 aaPredicted RBP14.11□□□□□ -0.15
UPF3A-210ENST00000493727 TNKSO95271 1327 aa14.11□□□□□ -0.15
UPF3A-210ENST00000493727 CHD9Q3L8U1 2897 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 F5H6K3 240 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 SH2B2O14492 632 aaPredicted RBP14.1□□□□□ -0.15
UPF3A-210ENST00000493727 NRG2O14511 850 aaPredicted RBP14.1□□□□□ -0.15
UPF3A-210ENST00000493727 ATP2A1O14983 1001 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 ZBED4O75132 1171 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 TTLL1O95922 423 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 NDUFB10O96000 172 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 RARBP10826 455 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 ADCYAP1R1P41586 468 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 MCM2P49736 904 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 AK2P54819 239 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 EXOSC10Q01780 885 aaKnown RBP14.1□□□□□ -0.15
UPF3A-210ENST00000493727 KLRC3Q07444 240 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 COL9A3Q14050 684 aaPredicted RBP14.1□□□□□ -0.15
UPF3A-210ENST00000493727 AGERQ15109 404 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 ZNF792Q3KQV3 632 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 PRAMEF19Q5SWL8 479 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 IFIT1BQ5T764 474 aaKnown RBP14.1□□□□□ -0.15
UPF3A-210ENST00000493727 REPS2Q8NFH8 660 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms