RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 IL17REQ8NFR9 667 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 GJA10Q969M2 543 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 CCDC127Q96BQ5 260 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 MAPK4P31152 587 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 PKP1Q13835 747 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 RFX6Q8HWS3 928 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 VSTM4Q8IW00 320 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 FAM186BQ8IYM0 893 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 LINC00301Q8NCQ3 95 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 BEGAINQ9BUH8 593 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 PPIP5K2O43314 1243 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 HDAC11Q96DB2 347 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 ATP10AO60312 1499 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 SMIM24O75264 130 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 KIF23Q02241 960 aaPredicted RBP21.84■■□□□ 1.09
RNF40-203ENST00000493683 SMCR8Q8TEV9 937 aaPredicted RBP21.84■■□□□ 1.09
RNF40-203ENST00000493683 UIMC1Q96RL1 719 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 ORAI2Q96SN7 254 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 SGO2Q562F6 1265 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 MAP3K15Q6ZN16 1313 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 SGK1O00141 431 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 MSH2P43246 934 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 BCAMP50895 628 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 SESN3P58005 492 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 LRRC47Q8N1G4 583 aaKnown RBP21.84■■□□□ 1.09
RNF40-203ENST00000493683 SEPT10Q9P0V9 454 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 POC1B-GALNT4F8VUJ3 575 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 TLR3O15455 904 aaKnown RBP21.84■■□□□ 1.09
RNF40-203ENST00000493683 GYG1P46976 350 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 CHRNDQ07001 517 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 GAS2L3Q86XJ1 694 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 PDZD8Q8NEN9 1154 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 ZNF653Q96CK0 615 aa21.84■■□□□ 1.09
RNF40-203ENST00000493683 CALR3Q96L12 384 aaKnown RBP21.84■■□□□ 1.09
RNF40-203ENST00000493683 SERPING1P05155 500 aa21.83■■□□□ 1.09
RNF40-203ENST00000493683 BIRC2Q13490 618 aa21.83■■□□□ 1.09
RNF40-203ENST00000493683 DPCR1Q3MIW9 517 aa21.83■■□□□ 1.09
RNF40-203ENST00000493683 DIS3Q9Y2L1 958 aaKnown RBP21.83■■□□□ 1.09
RNF40-203ENST00000493683 PTPREP23469 700 aa21.83■■□□□ 1.09
RNF40-203ENST00000493683 ZBTB17Q13105 803 aa21.83■■□□□ 1.09
RNF40-203ENST00000493683 ALCAMQ13740 583 aa21.83■■□□□ 1.09
RNF40-203ENST00000493683 LRCH2Q5VUJ6 765 aa21.83■■□□□ 1.09
RNF40-203ENST00000493683 ADAT2Q7Z6V5 191 aaKnown RBP21.83■■□□□ 1.09
RNF40-203ENST00000493683 ANAPC5Q9UJX4 755 aa21.83■■□□□ 1.09
RNF40-203ENST00000493683 ZBTB24O43167 697 aaPredicted RBP21.83■■□□□ 1.08
RNF40-203ENST00000493683 MMP1P03956 469 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 CUL1Q13616 776 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 DIXDC1Q155Q3 683 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 KCTD16Q68DU8 428 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 CAPN12Q6ZSI9 719 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 TRMT2AQ8IZ69 625 aaKnown RBP21.83■■□□□ 1.08
RNF40-203ENST00000493683 MAN1B1Q9UKM7 699 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 CLASP1Q7Z460 1538 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 ESRRGP62508 458 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 KAZNQ674X7 775 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 PPP4R3CPQ6ZMV5 832 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 TMC4Q7Z404 712 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 UHMK1Q8TAS1 419 aaKnown RBP21.83■■□□□ 1.08
RNF40-203ENST00000493683 PCDHB4Q9Y5E5 795 aa21.83■■□□□ 1.08
RNF40-203ENST00000493683 MCF2LO15068 1137 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 CCNE1P24864 410 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 ITKQ08881 620 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 ANKRD13CQ8N6S4 541 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 ANKRD36BP1Q96IX9 119 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 LEMD3Q9Y2U8 911 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 HNRNPDLO14979 420 aaKnown RBP21.82■■□□□ 1.08
RNF40-203ENST00000493683 FAM98CQ17RN3 349 aaKnown RBP21.82■■□□□ 1.08
RNF40-203ENST00000493683 NACC1Q96RE7 527 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 SPATS2LQ9NUQ6 558 aaKnown RBP21.82■■□□□ 1.08
RNF40-203ENST00000493683 LRRIQ4A6NIV6 560 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 MED7O43513 233 aa21.82■■□□□ 1.08
RNF40-203ENST00000493683 SPECC1L-ADORA2AF8WAN1 911 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 CPP00450 1065 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 EMBQ6PCB8 327 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 NEK9Q8TD19 979 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 KLHL29Q96CT2 875 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 MLH3Q9UHC1 1453 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 PDCD2Q16342 344 aaPredicted RBP21.81■■□□□ 1.08
RNF40-203ENST00000493683 ZC3H15Q8WU90 426 aaKnown RBP21.81■■□□□ 1.08
RNF40-203ENST00000493683 TMEM232C9JQI7 657 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 GOLGA8HP0CJ92 632 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 IFNAR1P17181 557 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 BAG6P46379 1132 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 ABCB5Q2M3G0 1257 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 LRRC24Q50LG9 513 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 GLE1Q53GS7 698 aaKnown RBP21.81■■□□□ 1.08
RNF40-203ENST00000493683 TTBK2Q6IQ55 1244 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 SRRM1Q8IYB3 904 aaKnown RBP21.81■■□□□ 1.08
RNF40-203ENST00000493683 SCYL3Q8IZE3 742 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 CACTINQ8WUQ7 758 aaKnown RBP21.81■■□□□ 1.08
RNF40-203ENST00000493683 ZNF233A6NK53 670 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 POLA2Q14181 598 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 NAA35Q5VZE5 725 aa21.81■■□□□ 1.08
RNF40-203ENST00000493683 C11orf57Q6ZUT1 292 aaPredicted RBP21.81■■□□□ 1.08
RNF40-203ENST00000493683 SRPRBQ9Y5M8 271 aaKnown RBP21.81■■□□□ 1.08
RNF40-203ENST00000493683 CYP21A2P08686 494 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 CCPG1Q9ULG6 757 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 PTPN22Q9Y2R2 807 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 IPO5O00410 1097 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms