RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 TBX3O15119 743 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 CA12O43570 354 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 NR1I2O75469 434 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 LONP1P36776 959 aaKnown RBP14.34□□□□□ -0.11
VPS52-220ENST00000493674 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS52-220ENST00000493674 NDUFA8P51970 172 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 PLS1Q14651 629 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 CALCRLQ16602 461 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 Q3C1V9 767 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 PCNX4Q63HM2 1172 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 CAVIN1Q6NZI2 390 aaKnown RBP14.34□□□□□ -0.11
VPS52-220ENST00000493674 NSMFQ6X4W1 530 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 CCDC73Q6ZRK6 1079 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 NIPA1Q7RTP0 329 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 IGSF22Q8N9C0 903 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 HAS1Q92839 578 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 TAAR1Q96RJ0 339 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 PDCD2LQ9BRP1 358 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 R3HDMLQ9H3Y0 253 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 PXMP2Q9NR77 195 aa14.34□□□□□ -0.11
VPS52-220ENST00000493674 A0A1B0GVL5 298 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 VWA3AA6NCI4 1184 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 MEIS1O00470 390 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 ERCC3P19447 782 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 INHBEP58166 350 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 PGM5Q15124 567 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 XRRA1Q6P2D8 792 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 DTHD1Q6ZMT9 781 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 RBM43Q6ZSC3 357 aaKnown RBP14.33□□□□□ -0.12
VPS52-220ENST00000493674 USP49Q70CQ1 688 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 CLSTN2Q9H4D0 955 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 MROH8Q9H579 483 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 DACT1Q9NYF0 836 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 UBIAD1Q9Y5Z9 338 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 ASTN1O14525 1302 aa14.33□□□□□ -0.12
VPS52-220ENST00000493674 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 AOC2O75106 756 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 BCRP11274 1271 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 TM4SF4P48230 202 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 MRPS9P82933 396 aaKnown RBP14.32□□□□□ -0.12
VPS52-220ENST00000493674 GRM1Q13255 1194 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 FAM110CQ1W6H9 321 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 CEP55Q53EZ4 464 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 FAM133AQ8N9E0 248 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 DNERQ8NFT8 737 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 CYP2W1Q8TAV3 490 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 SMCR8Q8TEV9 937 aaPredicted RBP14.32□□□□□ -0.12
VPS52-220ENST00000493674 SYMPKQ92797 1274 aaKnown RBP14.32□□□□□ -0.12
VPS52-220ENST00000493674 SYAP1Q96A49 352 aaPredicted RBP14.32□□□□□ -0.12
VPS52-220ENST00000493674 AK8Q96MA6 479 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 TIGD1Q96MW7 591 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 RMDN3Q96TC7 470 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
VPS52-220ENST00000493674 A0A087X0B3 334 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 MSH4O15457 936 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
VPS52-220ENST00000493674 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
VPS52-220ENST00000493674 UBXN2AP68543 259 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 SETQ01105 290 aaPredicted RBP14.31□□□□□ -0.12
VPS52-220ENST00000493674 SPIRE1Q08AE8 756 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 SREBF2Q12772 1141 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 PDIA5Q14554 519 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 ZSCAN23Q3MJ62 389 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 NCAPG2Q86XI2 1143 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 IFNL1Q8IU54 200 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 SLFN12Q8IYM2 578 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 GPRC5AQ8NFJ5 357 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 SLC5A5Q92911 643 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 EPSTI1Q96J88 318 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 FGD4Q96M96 766 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 FAM20AQ96MK3 541 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 PURBQ96QR8 312 aaKnown RBP14.31□□□□□ -0.12
VPS52-220ENST00000493674 MXRA8Q9BRK3 442 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 BEGAINQ9BUH8 593 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 CCSER1Q9C0I3 900 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 PORCNQ9H237 461 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 SAGE1Q9NXZ1 904 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 FAM13BQ9NYF5 915 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 KCNH3Q9ULD8 1083 aa14.31□□□□□ -0.12
VPS52-220ENST00000493674 LOC102724159A0A0B4J2E5 919 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 ZNF202O95125 648 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 ITGB5P18084 799 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 EDNRBP24530 442 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 SYKP43405 635 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 CCNA1P78396 465 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 PWP2Q15269 919 aaKnown RBP14.3□□□□□ -0.12
VPS52-220ENST00000493674 E2F4Q16254 413 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 PRR16Q569H4 304 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 VSIG10LQ86VR7 867 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 ELOA2Q8IYF1 753 aaPredicted RBP14.3□□□□□ -0.12
VPS52-220ENST00000493674 NSUN6Q8TEA1 469 aaKnown RBP14.3□□□□□ -0.12
VPS52-220ENST00000493674 IWS1Q96ST2 819 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 ANP32EQ9BTT0 268 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 NUP62CLQ9H1M0 184 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 VAV3Q9UKW4 847 aa14.3□□□□□ -0.12
VPS52-220ENST00000493674 SOWAHBA6NEL2 793 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 SLC26A4O43511 780 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 ACTN4O43707 911 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms