RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 PCDHA6Q9UN73 950 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 CLEC11AQ9Y240 323 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 PCDHA8Q9Y5H6 950 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 ZHX2Q9Y6X8 837 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 MYH7BA7E2Y1 1941 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 ABCB11O95342 1321 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 CCDC194A0A1B0GVG4 234 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 SPDYE5A6NIY4 337 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 TRIM75PA6NK02 468 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 SPTLC2O15270 562 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 SCP2P22307 547 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 TOB1P50616 345 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 RWDD2BP57060 319 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 PTPAQ15257 358 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 LDLRAD1Q5T700 205 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 REXO1Q8N1G1 1221 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 COA7Q96BR5 231 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 RRAGCQ9HB90 399 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 ARGLU1Q9NWB6 273 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 PPP1R9AQ9ULJ8 1098 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 CLIC4Q9Y696 253 aa8.11□□□□□ -1.11
SMARCE1-211ENST00000493660 A0A087WUV0 522 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 A0A1W2PQ27 194 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 A0A1W2PQ64 194 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 A0A1W2PQD8 194 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 GOLGA6L4A6NEF3 574 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 CXCL11O14625 94 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 CCP110O43303 1012 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 SLU7O95391 586 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 CLK2P49760 499 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 PPIL2Q13356 520 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 AP3B2Q13367 1082 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 NONOQ15233 471 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 SF3A1Q15459 793 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 TTC38Q5R3I4 469 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 NAIF1Q69YI7 327 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 ARMCX6Q7L4S7 300 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 SAMD3Q8N6K7 520 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 PROCA1Q8NCQ7 364 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 MAF1Q9H063 256 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 RPAP3Q9H6T3 665 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 KCNH4Q9UQ05 1017 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 PCDHA1Q9Y5I3 950 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 GOLGB1Q14789 3259 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 TMCO5BA8MYB1 307 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 GADD45BO75293 160 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 NEBLO76041 1014 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 ZRANB2O95218 330 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 SETSIPP0DME0 302 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 PRKG1Q13976 671 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 TTLL12Q14166 644 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 ELF2Q15723 593 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 CEP135Q66GS9 1140 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 ADALQ6DHV7 355 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 TTC19Q6DKK2 380 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 PIK3AP1Q6ZUJ8 805 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 KIFC2Q96AC6 838 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 PGBD1Q96JS3 809 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 NAP1L4Q99733 375 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 FTOQ9C0B1 505 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 TANGO6Q9C0B7 1094 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 IRAK4Q9NWZ3 460 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 ZNF215Q9UL58 517 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 FZD1Q9UP38 647 aa8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 MRPL11Q9Y3B7 192 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-211ENST00000493660 A0A0G2JLL6 359 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 PIK3CDO00329 1044 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 KINO60870 393 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 CUTAO60888 179 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 ZBED4O75132 1171 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 FOSP01100 380 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 ICAM1P05362 532 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 GCFC2P16383 781 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 ELF1P32519 619 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 OAZ1P54368 228 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 HMGCS2P54868 508 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 CEBPZQ03701 1054 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 GRIK3Q13003 919 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 PDCD2Q16342 344 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 EARS2Q5JPH6 523 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 MAP1SQ66K74 1059 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 PRRT2Q7Z6L0 340 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 TADA2BQ86TJ2 420 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 PSTPIP2Q9H939 334 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 SLC38A10Q9HBR0 1119 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 SMCHD1A6NHR9 2005 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 FAM205CA6NFA0 338 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 LAD1O00515 517 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 POLR3GO15318 223 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 CAND2O75155 1236 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 FLOT1O75955 427 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms