RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TRIM60Q495X7 471 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 TMEM63BQ5T3F8 832 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 XRRA1Q6P2D8 792 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 USP17L6PQ6QN14 398 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 HEATR3Q7Z4Q2 680 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 TEX2Q8IWB9 1127 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 ZNF713Q8N859 430 aaPredicted RBP8.03□□□□□ -1.12
TOP3A-207ENST00000493648 TOX2Q96NM4 488 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 LBHD1Q9BQE6 289 aaPredicted RBP8.03□□□□□ -1.12
TOP3A-207ENST00000493648 PDCD2LQ9BRP1 358 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 SEZ6LQ9BYH1 1024 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 FAM217BQ9NTX9 383 aaPredicted RBP8.03□□□□□ -1.12
TOP3A-207ENST00000493648 PDRG1Q9NUG6 133 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 POLR3EQ9NVU0 708 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 RBM27Q9P2N5 1060 aaKnown RBP8.03□□□□□ -1.12
TOP3A-207ENST00000493648 COLQQ9Y215 455 aaPredicted RBP8.03□□□□□ -1.12
TOP3A-207ENST00000493648 SSUH2Q9Y2M2 353 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 MRVI1Q9Y6F6 885 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 MROH7Q68CQ1 1323 aa8.03□□□□□ -1.12
TOP3A-207ENST00000493648 KIAA1217Q5T5P2 1943 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 SPDYE3A6NKU9 549 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 ARVCFO00192 962 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 TLR3O15455 904 aaKnown RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 PRPF3O43395 683 aaKnown RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 PQBP1O60828 265 aaKnown RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 GH1P01241 217 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 MYL3P08590 195 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 CLTBP09497 229 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 TGFB3P10600 412 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 PDIA3P30101 505 aaKnown RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 CDK7P50613 346 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 FUT2Q10981 343 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 ITGA7Q13683 1181 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 LAMC2Q13753 1193 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 TOB2Q14106 344 aaPredicted RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 LY6KQ17RY6 165 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 PPP1R18Q6NYC8 613 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 CCDC62Q6P9F0 684 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 CXCL17Q6UXB2 119 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 ANKRD33Q7Z3H0 272 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 COPS5Q92905 334 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 GPKOWQ92917 476 aaPredicted RBP eCLIP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 ZNF274Q96GC6 653 aaPredicted RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 MTG1Q9BT17 334 aaPredicted RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 UPF3BQ9BZI7 483 aaKnown RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 GLT8D2Q9H1C3 349 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 EHMT1Q9H9B1 1298 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 PRDM5Q9NQX1 630 aaPredicted RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 TMEM39AQ9NV64 488 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 DDX41Q9UJV9 622 aaKnown RBP8.02□□□□□ -1.13
TOP3A-207ENST00000493648 CNTNAP5Q8WYK1 1306 aa8.02□□□□□ -1.13
TOP3A-207ENST00000493648 BRCA2P51587 3418 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 LRRC37A2A6NM11 1700 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 SMCO2A6NFE2 343 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 A6NJR5 290 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 CPLX1O14810 134 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 ARIH2O95376 493 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 FOSP01100 380 aaPredicted RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 SCG2P13521 617 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 PTGS1P23219 599 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 BMP8BP34820 402 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 MAGEA10P43363 369 aaPredicted RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 CCT2P78371 535 aaKnown RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 ANKRD1Q15327 319 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 PFKFB3Q16875 520 aaPredicted RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 GNPTABQ3T906 1256 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 HABP4Q5JVS0 413 aaKnown RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 PCNX4Q63HM2 1172 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 WWC2Q6AWC2 1192 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 CPLX2Q6PUV4 134 aaKnown RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 NLRX1Q86UT6 975 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 DHX37Q8IY37 1157 aaKnown RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 CCDC12Q8WUD4 166 aaPredicted RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 ZFP91Q96JP5 570 aaPredicted RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 GDF15Q99988 308 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 UBE2OQ9C0C9 1292 aaKnown RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 ALDH8A1Q9H2A2 487 aaPredicted RBP8.01□□□□□ -1.13
TOP3A-207ENST00000493648 MLXIPQ9HAP2 919 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 RIC8AQ9NPQ8 531 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 BARHL2Q9NY43 387 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 RTEL1Q9NZ71 1219 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 PCDHA6Q9UN73 950 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 PCDHA8Q9Y5H6 950 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 MYH7BA7E2Y1 1941 aa8.01□□□□□ -1.13
TOP3A-207ENST00000493648 A0A1W2PPC1 479 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 TRIM43BA6NCK2 446 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 SPATA31C2B4DYI2 1134 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 STXBP3O00186 592 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 KIAA0355O15063 1070 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 FIBPO43427 364 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 RGS20O76081 388 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 SEC24BO95487 1268 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 RAG1P15918 1043 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 IFNAR1P17181 557 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 ICAM3P32942 547 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 ADCY7P51828 1080 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 MRPS9P82933 396 aaKnown RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 PURAQ00577 322 aaKnown RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 MDM2Q00987 491 aaPredicted RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 ARHGAP1Q07960 439 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms