RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 MORC4Q8TE76 937 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 NUP133Q8WUM0 1156 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 BADQ92934 168 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 CCDC136Q96JN2 1154 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 GLT1D1Q96MS3 346 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 TAAR1Q96RJ0 339 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 AP5M1Q9H0R1 490 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 VTA1Q9NP79 307 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 PNMA2Q9UL42 364 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 LTBP2Q14767 1821 aa12.41□□□□□ -0.42
COL6A3-214ENST00000493608 ABCB11O95342 1321 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 A0A1W2PPC1 479 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 PPP1R11O60927 126 aaPredicted RBP12.4□□□□□ -0.42
COL6A3-214ENST00000493608 CST5P28325 142 aaPredicted RBP12.4□□□□□ -0.42
COL6A3-214ENST00000493608 PDE4DQ08499 809 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 GRM4Q14833 912 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 SART3Q15020 963 aaKnown RBP12.4□□□□□ -0.42
COL6A3-214ENST00000493608 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 CREB3L3Q68CJ9 461 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 CXCL17Q6UXB2 119 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 HOMER1Q86YM7 354 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 TDHQ8IZJ6 230 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 PIGSQ96S52 555 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 MYL10Q9BUA6 226 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 LRRC2Q9BYS8 371 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 WDR11Q9BZH6 1224 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
COL6A3-214ENST00000493608 TMEM39AQ9NV64 488 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 COL20A1Q9P218 1284 aa12.4□□□□□ -0.42
COL6A3-214ENST00000493608 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.42
COL6A3-214ENST00000493608 DCDC2CA8MYV0 355 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 PRC1O43663 620 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 CFBP00751 764 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 CLTBP09497 229 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 FAAP100Q0VG06 881 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 TROAPQ12815 778 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 NECTIN1Q15223 517 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 FSCN1Q16658 493 aaKnown RBP12.39□□□□□ -0.43
COL6A3-214ENST00000493608 CATIPQ7Z7H3 387 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 RGS22Q8NE09 1264 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 DNERQ8NFT8 737 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 SYTL5Q8TDW5 730 aaPredicted RBP12.39□□□□□ -0.43
COL6A3-214ENST00000493608 COPS5Q92905 334 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 MTMR8Q96EF0 704 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 AMNQ9BXJ7 453 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 LY9Q9HBG7 655 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
COL6A3-214ENST00000493608 ELP1O95163 1332 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 LAMA3Q16787 3333 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
COL6A3-214ENST00000493608 OPLAHO14841 1288 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 ZBTB5O15062 677 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 CYTH3O43739 400 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 RAG1P15918 1043 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 CDK7P50613 346 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 PSMC6P62333 389 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 DUSP28Q4G0W2 176 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 NFXL1Q6ZNB6 911 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 MCF2L2Q86YR7 1114 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 TTC13Q8NBP0 860 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 RMDN3Q96TC7 470 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
COL6A3-214ENST00000493608 KIAA1217Q5T5P2 1943 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 RBM47A0AV96 593 aaKnown RBP12.37□□□□□ -0.43
COL6A3-214ENST00000493608 ARVCFO00192 962 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 EIF2AK2P19525 551 aaKnown RBP12.37□□□□□ -0.43
COL6A3-214ENST00000493608 RXRAP19793 462 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 EDNRBP24530 442 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 HOXA13P31271 388 aaPredicted RBP12.37□□□□□ -0.43
COL6A3-214ENST00000493608 MCM5P33992 734 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 MLLT3P42568 568 aaPredicted RBP12.37□□□□□ -0.43
COL6A3-214ENST00000493608 NKX3-2P78367 333 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 SHHQ15465 462 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 C9orf50Q5SZB4 431 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 ARHGEF16Q5VV41 709 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 SEPT14Q6ZU15 432 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 NYAP1Q6ZVC0 841 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 ANKRD33Q7Z3H0 272 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 CMTR1Q8N1G2 835 aaKnown RBP12.37□□□□□ -0.43
COL6A3-214ENST00000493608 OR6J1Q8NGC5 347 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 PPP1R13LQ8WUF5 828 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 TOX2Q96NM4 488 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 MPHOSPH6Q99547 160 aaKnown RBP12.37□□□□□ -0.43
COL6A3-214ENST00000493608 Q9Y3F1 56 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
COL6A3-214ENST00000493608 LOC102724159A0A0B4J2E5 919 aa12.36□□□□□ -0.43
COL6A3-214ENST00000493608 CCDC69A6NI79 296 aa12.36□□□□□ -0.43
COL6A3-214ENST00000493608 B4DLN1 442 aa12.36□□□□□ -0.43
COL6A3-214ENST00000493608 SMAPO00193 183 aa12.36□□□□□ -0.43
COL6A3-214ENST00000493608 SH2B2O14492 632 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-214ENST00000493608 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
COL6A3-214ENST00000493608 ZEB2O60315 1214 aa12.36□□□□□ -0.43
COL6A3-214ENST00000493608 CDC45O75419 566 aa12.36□□□□□ -0.43
COL6A3-214ENST00000493608 ARIH2O95376 493 aa12.36□□□□□ -0.43
COL6A3-214ENST00000493608 MYL3P08590 195 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms