RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 ARMCX2Q7L311 632 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 ZNF444Q8N0Y2 327 aaPredicted RBP8.56□□□□□ -1.04
SPTA1-208ENST00000492934 ZNF511Q8NB15 262 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 KLHDC9Q8NEP7 349 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 CHST13Q8NET6 341 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 CHMP4CQ96CF2 233 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 FGD4Q96M96 766 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 TOX2Q96NM4 488 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 FSD1Q9BTV5 496 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 NACAP1Q9BZK3 213 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 NAPBQ9H115 298 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 ABHD16BQ9H3Z7 469 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 MTMR4Q9NYA4 1195 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 TBX21Q9UL17 535 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 SYNPO2Q9UMS6 1093 aa8.56□□□□□ -1.04
SPTA1-208ENST00000492934 A0A0U1RQG5 324 aaPredicted RBP8.55□□□□□ -1.04
SPTA1-208ENST00000492934 TMEM232C9JQI7 657 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 ERC2O15083 957 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 ASGR1P07306 291 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 SLC3A2P08195 630 aaKnown RBP8.55□□□□□ -1.04
SPTA1-208ENST00000492934 PDE4BQ07343 736 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 CCDC144BQ3MJ40 725 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 SLFN13Q68D06 897 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 CCSAPQ6IQ19 270 aaPredicted RBP8.55□□□□□ -1.04
SPTA1-208ENST00000492934 RASGRP2Q7LDG7 609 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 CCDC144CPQ8IYA2 1237 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 IFNL3Q8IZI9 196 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 PCSK9Q8NBP7 692 aaKnown RBP8.55□□□□□ -1.04
SPTA1-208ENST00000492934 VTI1AQ96AJ9 217 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 SEC62Q99442 399 aaKnown RBP8.55□□□□□ -1.04
SPTA1-208ENST00000492934 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 UPF3AQ9H1J1 476 aaKnown RBP8.55□□□□□ -1.04
SPTA1-208ENST00000492934 ACAD9Q9H845 621 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 RNF146Q9NTX7 359 aa8.55□□□□□ -1.04
SPTA1-208ENST00000492934 ELP1O95163 1332 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 TTC41PQ6P2S7 1318 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 TLR3O15455 904 aaKnown RBP8.54□□□□□ -1.04
SPTA1-208ENST00000492934 ADH1CP00326 375 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 TIMP1P01033 207 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 TIMP2P16035 220 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 SLC1A4P43007 532 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 GJA9P57773 515 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 CNTN2Q02246 1040 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 PPARAQ07869 468 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 PPIGQ13427 754 aaKnown RBP eCLIP8.54□□□□□ -1.04
SPTA1-208ENST00000492934 LINC01559Q495D7 138 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 MFSD5Q6N075 450 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 PSRC1Q6PGN9 363 aaPredicted RBP8.54□□□□□ -1.04
SPTA1-208ENST00000492934 CCDC174Q6PII3 467 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 NOL8Q76FK4 1167 aaKnown RBP8.54□□□□□ -1.04
SPTA1-208ENST00000492934 FAM160B2Q86V87 743 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 NEDD1Q8NHV4 660 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 PI4K2BQ8TCG2 481 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 MKL1Q969V6 931 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 TIFAQ96CG3 184 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 GMCL1Q96IK5 515 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.54□□□□□ -1.04
SPTA1-208ENST00000492934 DCTPP1Q9H773 170 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 A1CFQ9NQ94 594 aaKnown RBP8.54□□□□□ -1.04
SPTA1-208ENST00000492934 MAP10Q9P2G4 905 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 STX8Q9UNK0 236 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 MTMR7Q9Y216 660 aa8.54□□□□□ -1.04
SPTA1-208ENST00000492934 ZNFX1Q9P2E3 1918 aaKnown RBP8.54□□□□□ -1.04
SPTA1-208ENST00000492934 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-208ENST00000492934 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-208ENST00000492934 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-208ENST00000492934 TSPY2A6NKD2 308 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 PATL2C9JE40 543 aaKnown RBP8.53□□□□□ -1.04
SPTA1-208ENST00000492934 ARVCFO00192 962 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 PPFIA3O75145 1194 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 ALAS1P13196 640 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 CSF2RAP15509 400 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 MX1P20591 662 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 WDR4P57081 412 aaKnown RBP8.53□□□□□ -1.04
SPTA1-208ENST00000492934 BEX3Q00994 111 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 TFAP4Q01664 338 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 TNFAIP2Q03169 654 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 GRIN2CQ14957 1233 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 CCDC96Q2M329 555 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 TPRNQ4KMQ1 711 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 ZMYM1Q5SVZ6 1142 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 CCDC129Q6ZRS4 1044 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 KCTD1Q719H9 257 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 TLK2Q86UE8 772 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 FBXO16Q8IX29 292 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-208ENST00000492934 FAM126BQ8IXS8 530 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 FAM133AQ8N9E0 248 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 USP38Q8NB14 1042 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 OTUD7AQ8TE49 926 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-208ENST00000492934 CHURC1Q8WUH1 139 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 AGBL1Q96MI9 1066 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 KATNBL1Q9H079 304 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 DDX49Q9Y6V7 483 aaKnown RBP8.53□□□□□ -1.04
SPTA1-208ENST00000492934 CHD9Q3L8U1 2897 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 ASTN1O14525 1302 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 ZNF536O15090 1300 aa8.53□□□□□ -1.04
SPTA1-208ENST00000492934 ASB14A6NK59 587 aa8.52□□□□□ -1.05
SPTA1-208ENST00000492934 CTAGE5O15320 804 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms