RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 STRIP2Q9ULQ0 834 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 RRP7AQ9Y3A4 280 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 DAGLAQ9Y4D2 1042 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ZBTB7BO15156 539 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 FZD6O60353 706 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 TBCAO75347 108 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 HSPA4LO95757 839 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 ADH1BP00325 375 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 SLC3A2P08195 630 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 FBXO45P0C2W1 286 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 PCP11498 1178 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 HADHAP40939 763 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 GRK6P43250 576 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 IREB2P48200 963 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 SOX9P48436 509 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 PEX5P50542 639 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 IL1RL1Q01638 556 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 GBE1Q04446 702 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 CBX2Q14781 532 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 ODF1Q14990 250 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 POSTNQ15063 836 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 NR6A1Q15406 480 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 PDCD2Q16342 344 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 PPP2R5EQ16537 467 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 PROSER3Q2NL68 480 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 MTERF2Q49AM1 385 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC30Q5VVM6 783 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 HEATR6Q6AI08 1181 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 LIN54Q6MZP7 749 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 TRIM67Q6ZTA4 783 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 SPATC1Q76KD6 591 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 EPM2AIP1Q7L775 607 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 C7orf31Q8N865 590 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 TPCN2Q8NHX9 752 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 UTP15Q8TED0 518 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 SGCDQ92629 289 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 CEP295NLQ96MC4 621 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 MPHOSPH8Q99549 860 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 PRR14Q9BWN1 585 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 TMEM165Q9HC07 324 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 ABCB6Q9NP58 842 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 LUC7LQ9NQ29 371 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 RRAGDQ9NQL2 400 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 HPF1Q9NWY4 346 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 CWC15Q9P013 229 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 ZNF624Q9P2J8 865 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 RIMKLBQ9ULI2 386 aa4.73□□□□□ -1.65
BRCA1-220ENST00000492859 MRPL11Q9Y3B7 192 aaKnown RBP4.73□□□□□ -1.65
BRCA1-220ENST00000492859 SPAG9O60271 1321 aaKnown RBP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 CYP2D7A0A087X1C5 515 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 ZBBXA8MT70 800 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 H0Y626 953 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 FYB1O15117 783 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 POLR3GO15318 223 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 GFRA3O60609 400 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 RTN2O75298 545 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 DDX58O95786 925 aaKnown RBP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 ZKSCAN1P17029 563 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 CYP11B2P19099 503 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 HSD17B2P37059 387 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 GRIK1P39086 918 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 ASMTP46597 345 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 USP11P51784 963 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 SMTNP53814 917 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 NRLP54845 237 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 DEUP1Q05D60 604 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 ADCY1Q08828 1119 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 FAPQ12884 760 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 PABPC4Q13310 644 aaKnown RBP eCLIP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 IFIT5Q13325 482 aaKnown RBP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 SCARB2Q14108 478 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 SSPNQ14714 243 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 COG2Q14746 738 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 PPP1R7Q15435 360 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 TBC1D25Q3MII6 688 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 MMEL1Q495T6 779 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 C1orf53Q5VUE5 145 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 KAZNQ674X7 775 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 TTC19Q6DKK2 380 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 BRICD5Q6PL45 260 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 GBP6Q6ZN66 633 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 Q6ZNB5 142 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC149Q6ZUS6 474 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 INTS8Q75QN2 995 aaKnown RBP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 KDELC2Q7Z4H8 507 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 PPP1R42Q7Z4L9 355 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 GALNTL5Q7Z4T8 443 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 IL17RDQ8NFM7 739 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 OR52K2Q8NGK3 314 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 RASSF8Q8NHQ8 419 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 ANKRD24Q8TF21 1146 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 CHFRQ96EP1 664 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 SPSB2Q99619 263 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 LSM14BQ9BX40 385 aaKnown RBP4.72□□□□□ -1.65
BRCA1-220ENST00000492859 TNMDQ9H2S6 317 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 VPS37BQ9H9H4 285 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 RSAD1Q9HA92 442 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 PDLIM7Q9NR12 457 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 MTUS1Q9ULD2 1270 aa4.72□□□□□ -1.65
BRCA1-220ENST00000492859 GPR34Q9UPC5 381 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms