RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 KATNAL1Q9BW62 490 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 GTF2IRD1Q9UHL9 959 aa12.9□□□□□ -0.34
SND1-215ENST00000492772 CKBP12277 381 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 NT5C2P49902 561 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 ERVK-21P61565 698 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 CDC37Q16543 378 aaPredicted RBP12.89□□□□□ -0.35
SND1-215ENST00000492772 MCMDC2Q4G0Z9 681 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 MFSD6Q6ZSS7 791 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 MCF2L2Q86YR7 1114 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 C7orf31Q8N865 590 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 KAT2BQ92831 832 aa12.89□□□□□ -0.35
SND1-215ENST00000492772 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
SND1-215ENST00000492772 RNF41Q9H4P4 317 aaPredicted RBP12.89□□□□□ -0.35
SND1-215ENST00000492772 UBE2ZQ9H832 354 aaPredicted RBP12.89□□□□□ -0.35
SND1-215ENST00000492772 BRWD1Q9NSI6 2320 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 A0A0D9SFI3 127 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 NBNO60934 754 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 HSPD1P10809 573 aaKnown RBP12.88□□□□□ -0.35
SND1-215ENST00000492772 PTK7Q13308 1070 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 IKBKEQ14164 716 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 GPNMBQ14956 572 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 STXBP2Q15833 593 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 LY6KQ17RY6 165 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 CHST3Q7LGC8 479 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 TMCO2Q7Z6W1 182 aaPredicted RBP12.88□□□□□ -0.35
SND1-215ENST00000492772 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
SND1-215ENST00000492772 ESR2Q92731 530 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 FAM227BQ96M60 508 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 SUGCTQ9HAC7 445 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 MTUS1Q9ULD2 1270 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 CCDC171Q6TFL3 1326 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 EMSYQ7Z589 1322 aa12.88□□□□□ -0.35
SND1-215ENST00000492772 COL4A6Q14031 1691 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 PI4K2BG5E9Z4 385 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 F2P00734 622 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 GOLGA8HP0CJ92 632 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 PSEN2P49810 448 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 HAND2P61296 217 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 MFSD10Q14728 455 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 LEXMQ3ZCV2 418 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 DGKHQ86XP1 1220 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 TBC1D10CQ8IV04 446 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 RMDN3Q96TC7 470 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 C11orf16Q9NQ32 467 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 HDAC6Q9UBN7 1215 aa12.87□□□□□ -0.35
SND1-215ENST00000492772 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
SND1-215ENST00000492772 HAS3O00219 553 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
SND1-215ENST00000492772 ZNF286BP0CG31 522 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
SND1-215ENST00000492772 LAMC2Q13753 1193 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 KIAA0753Q2KHM9 967 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 ARHGEF16Q5VV41 709 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 ZNF589Q86UQ0 364 aaPredicted RBP12.86□□□□□ -0.35
SND1-215ENST00000492772 PNMA1Q8ND90 353 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.355e-7■□□□□ 11.2
SND1-215ENST00000492772 ALG1Q9BT22 464 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 COL20A1Q9P218 1284 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 DDX41Q9UJV9 622 aaKnown RBP12.86□□□□□ -0.35
SND1-215ENST00000492772 MRPL11Q9Y3B7 192 aaKnown RBP12.86□□□□□ -0.35
SND1-215ENST00000492772 INSL6Q9Y581 213 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 MRVI1Q9Y6F6 885 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 NEDD4P46934 1319 aa12.86□□□□□ -0.35
SND1-215ENST00000492772 FAM86C2PA6NEL3 165 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 LGR5O75473 907 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 AMHP03971 560 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 HOXD8P13378 290 aaPredicted RBP12.85□□□□□ -0.35
SND1-215ENST00000492772 EIF2AK2P19525 551 aaKnown RBP12.85□□□□□ -0.35
SND1-215ENST00000492772 KCNA5P22460 613 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 PDE1AP54750 535 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 NMIQ13287 307 aaPredicted RBP12.85□□□□□ -0.35
SND1-215ENST00000492772 TCTN1Q2MV58 587 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 TRIM71Q2Q1W2 868 aaKnown RBP12.85□□□□□ -0.35
SND1-215ENST00000492772 PUS10Q3MIT2 529 aaKnown RBP12.85□□□□□ -0.35
SND1-215ENST00000492772 ZNF618Q5T7W0 954 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 TRAF7Q6Q0C0 670 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 IQCA1Q86XH1 822 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 FAM178BQ8IXR5 827 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 ADGRF4Q8IZF3 695 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 FBXO22Q8NEZ5 403 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 SAMD11Q96NU1 681 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 UBA5Q9GZZ9 404 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 CPVLQ9H3G5 476 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 KAT14Q9H8E8 782 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 PXMP2Q9NR77 195 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 RALGAPA2Q2PPJ7 1873 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 NLRC5Q86WI3 1866 aa12.85□□□□□ -0.35
SND1-215ENST00000492772 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
SND1-215ENST00000492772 DHX16O60231 1041 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms