RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 PGM5Q15124 567 aa27.33■■□□□ 1.97
CTDSP1-211ENST00000492545 DEFB123Q8N688 67 aa27.33■■□□□ 1.97
CTDSP1-211ENST00000492545 HIPK3Q9H422 1215 aa27.33■■□□□ 1.97
CTDSP1-211ENST00000492545 B4GALT4O60513 344 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 STAM2O75886 525 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 MYCLP12524 364 aaPredicted RBP27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 CASTP20810 708 aaKnown RBP27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 EPHB4P54760 987 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 SMAD3P84022 425 aaKnown RBP27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 COL9A3Q14050 684 aaPredicted RBP27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 FCHSD1Q86WN1 690 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 RASEFQ8IZ41 740 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 AFG1LQ8WV93 481 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 PIBF1Q8WXW3 757 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 CUL5Q93034 780 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 RNPC3Q96LT9 517 aaKnown RBP27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 LRRC2Q9BYS8 371 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 TRPV6Q9H1D0 765 aa27.32■■□□□ 1.96
CTDSP1-211ENST00000492545 PIK3CDO00329 1044 aa27.31■■□□□ 1.96
CTDSP1-211ENST00000492545 PLEKHA8P1O95397 391 aa27.31■■□□□ 1.96
CTDSP1-211ENST00000492545 KCNB2Q92953 911 aa27.31■■□□□ 1.96
CTDSP1-211ENST00000492545 RBM28Q9NW13 759 aaKnown RBP27.31■■□□□ 1.96
CTDSP1-211ENST00000492545 REC8O95072 547 aa27.3■■□□□ 1.96
CTDSP1-211ENST00000492545 MMP3P08254 477 aa27.3■■□□□ 1.96
CTDSP1-211ENST00000492545 DGKDQ16760 1214 aa27.3■■□□□ 1.96
CTDSP1-211ENST00000492545 NBPF20Q3BBV1 942 aa27.3■■□□□ 1.96
CTDSP1-211ENST00000492545 TMTC3Q6ZXV5 915 aa27.3■■□□□ 1.96
CTDSP1-211ENST00000492545 NOC4LQ9BVI4 516 aaKnown RBP27.3■■□□□ 1.96
CTDSP1-211ENST00000492545 PPP1R12CQ9BZL4 782 aa27.3■■□□□ 1.96
CTDSP1-211ENST00000492545 RXRAP19793 462 aa27.29■■□□□ 1.96
CTDSP1-211ENST00000492545 ERICH6BQ5W0A0 696 aa27.29■■□□□ 1.96
CTDSP1-211ENST00000492545 XRRA1Q6P2D8 792 aa27.29■■□□□ 1.96
CTDSP1-211ENST00000492545 APOA5Q6Q788 366 aa27.29■■□□□ 1.96
CTDSP1-211ENST00000492545 DHX37Q8IY37 1157 aaKnown RBP27.29■■□□□ 1.96
CTDSP1-211ENST00000492545 PPTC7Q8NI37 304 aa27.29■■□□□ 1.96
CTDSP1-211ENST00000492545 FRMPD4Q14CM0 1322 aa27.29■■□□□ 1.96
CTDSP1-211ENST00000492545 EPB41L2O43491 1005 aaKnown RBP27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 RGS20O76081 388 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 CSF2RAP15509 400 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 CYP2C18P33260 490 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 RCAN1P53805 252 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 ADCK5Q3MIX3 580 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 GNPTABQ3T906 1256 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 PSRC1Q6PGN9 363 aaPredicted RBP27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 MICU3Q86XE3 530 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 TEX2Q8IWB9 1127 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 SMARCC2Q8TAQ2 1214 aa27.28■■□□□ 1.96
CTDSP1-211ENST00000492545 ZBTB43O43298 467 aa27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 HSPA4P34932 840 aa27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 FAM47CQ5HY64 1035 aa27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 SESTD1Q86VW0 696 aa27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 PSTPIP2Q9H939 334 aa27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 IL23AQ9NPF7 189 aa27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 TRMT13Q9NUP7 481 aaKnown RBP27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 MTMR10Q9NXD2 777 aa27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 SCN10AQ9Y5Y9 1956 aa27.27■■□□□ 1.96
CTDSP1-211ENST00000492545 KIAA1217Q5T5P2 1943 aa27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 MEIS2O14770 477 aa27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 PPFIA4O75335 1185 aa27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 TMEM240Q5SV17 173 aa27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 CELF3Q5SZQ8 465 aaKnown RBP27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 MYSM1Q5VVJ2 828 aa27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 C16orf59Q7L2K0 433 aa27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 RPUSD2Q8IZ73 545 aaKnown RBP27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 CMTR1Q8N1G2 835 aaKnown RBP27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 IL31RAQ8NI17 732 aa27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 KATNAL1Q9BW62 490 aa27.26■■□□□ 1.95
CTDSP1-211ENST00000492545 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.25■■□□□ 1.95
CTDSP1-211ENST00000492545 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.25■■□□□ 1.95
CTDSP1-211ENST00000492545 HOXD8P13378 290 aaPredicted RBP27.25■■□□□ 1.95
CTDSP1-211ENST00000492545 ICAM3P32942 547 aa27.25■■□□□ 1.95
CTDSP1-211ENST00000492545 FGD1P98174 961 aa27.25■■□□□ 1.95
CTDSP1-211ENST00000492545 INPP4AQ96PE3 977 aaPredicted RBP27.25■■□□□ 1.95
CTDSP1-211ENST00000492545 RTN1Q16799 776 aa27.24■■□□□ 1.95
CTDSP1-211ENST00000492545 ZNF697Q5TEC3 545 aa27.24■■□□□ 1.95
CTDSP1-211ENST00000492545 PCNX4Q63HM2 1172 aa27.24■■□□□ 1.95
CTDSP1-211ENST00000492545 USP17L6PQ6QN14 398 aa27.24■■□□□ 1.95
CTDSP1-211ENST00000492545 Q7L0L9 218 aa27.24■■□□□ 1.95
CTDSP1-211ENST00000492545 CCDC82Q8N4S0 544 aa27.24■■□□□ 1.95
CTDSP1-211ENST00000492545 MTIF3Q9H2K0 278 aaKnown RBP27.24■■□□□ 1.95
CTDSP1-211ENST00000492545 MRPS9P82933 396 aaKnown RBP27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 RASIP1Q5U651 963 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 RAB11FIP4Q86YS3 637 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 FBXL16Q8N461 479 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 KAT2BQ92831 832 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 TCEANC2Q96MN5 208 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 SPATA33Q96N06 139 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 MLXIPQ9HAP2 919 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 BRPF3Q9ULD4 1205 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 NOD1Q9Y239 953 aa27.23■■□□□ 1.95
CTDSP1-211ENST00000492545 TMEM265A0A087WTH1 108 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 CCDC196A0A1B0GTZ2 297 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 SPATA31C2B4DYI2 1134 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 PITPNM1O00562 1244 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 FIBPO43427 364 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 GGPS1O95749 300 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 FGBP02675 491 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 PFKMP08237 780 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 PSMA5P28066 241 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms