RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 ALYREFQ86V81 257 aaKnown RBP16.11■□□□□ 0.17
GPNMB-213ENST00000492512 DHX38Q92620 1227 aaKnown RBP16.11■□□□□ 0.17
GPNMB-213ENST00000492512 GTF2IRD1Q9UHL9 959 aa16.11■□□□□ 0.17
GPNMB-213ENST00000492512 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
GPNMB-213ENST00000492512 MYH7BA7E2Y1 1941 aa16.11■□□□□ 0.17
GPNMB-213ENST00000492512 FGRP09769 529 aa16.1■□□□□ 0.17
GPNMB-213ENST00000492512 ARHGAP1Q07960 439 aa16.1■□□□□ 0.17
GPNMB-213ENST00000492512 ZNF543Q08ER8 600 aa16.1■□□□□ 0.17
GPNMB-213ENST00000492512 C7orf31Q8N865 590 aa16.1■□□□□ 0.17
GPNMB-213ENST00000492512 RGS22Q8NE09 1264 aa16.1■□□□□ 0.17
GPNMB-213ENST00000492512 KAT2BQ92831 832 aa16.1■□□□□ 0.17
GPNMB-213ENST00000492512 UIMC1Q96RL1 719 aa16.1■□□□□ 0.17
GPNMB-213ENST00000492512 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
GPNMB-213ENST00000492512 MYH6P13533 1939 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 MICAL3Q7RTP6 2002 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 ALADP13716 330 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 IL9P15248 144 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 ALX1Q15699 326 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 DGKDQ16760 1214 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 TCTN1Q2MV58 587 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 PTCRAQ6ISU1 281 aaPredicted RBP16.09■□□□□ 0.17
GPNMB-213ENST00000492512 FBXO22Q8NEZ5 403 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.09■□□□□ 0.17
GPNMB-213ENST00000492512 OTUD7AQ8TE49 926 aaPredicted RBP16.09■□□□□ 0.17
GPNMB-213ENST00000492512 ALG1Q9BT22 464 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 HDAC6Q9UBN7 1215 aa16.09■□□□□ 0.17
GPNMB-213ENST00000492512 PSEN2P49810 448 aa16.08■□□□□ 0.16
GPNMB-213ENST00000492512 PTK7Q13308 1070 aa16.08■□□□□ 0.16
GPNMB-213ENST00000492512 STXBP2Q15833 593 aa16.08■□□□□ 0.16
GPNMB-213ENST00000492512 MIER1Q8N108 512 aa16.08■□□□□ 0.16
GPNMB-213ENST00000492512 NSUN6Q8TEA1 469 aaKnown RBP16.08■□□□□ 0.16
GPNMB-213ENST00000492512 C17orf80Q9BSJ5 609 aa16.08■□□□□ 0.16
GPNMB-213ENST00000492512 KATNAL1Q9BW62 490 aa16.08■□□□□ 0.16
GPNMB-213ENST00000492512 CTNNA3Q9UI47 895 aa16.08■□□□□ 0.16
GPNMB-213ENST00000492512 INSL6Q9Y581 213 aa16.08■□□□□ 0.16
GPNMB-213ENST00000492512 FGAP02671 866 aa16.07■□□□□ 0.16
GPNMB-213ENST00000492512 SNHG28P0DPA3 235 aa16.07■□□□□ 0.16
GPNMB-213ENST00000492512 MX1P20591 662 aa16.07■□□□□ 0.16
GPNMB-213ENST00000492512 PUS10Q3MIT2 529 aaKnown RBP16.07■□□□□ 0.16
GPNMB-213ENST00000492512 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
GPNMB-213ENST00000492512 ZNF618Q5T7W0 954 aa16.07■□□□□ 0.16
GPNMB-213ENST00000492512 TTC14Q96N46 770 aa16.07■□□□□ 0.16
GPNMB-213ENST00000492512 TAAR1Q96RJ0 339 aa16.07■□□□□ 0.16
GPNMB-213ENST00000492512 MAF1Q9H063 256 aa16.07■□□□□ 0.16
GPNMB-213ENST00000492512 MYO7AQ13402 2215 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 GRXCR2A6NFK2 248 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 LGR5O75473 907 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 MFSD10Q14728 455 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 PTPROQ16827 1216 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 KIAA0753Q2KHM9 967 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 MYOCDQ8IZQ8 938 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
GPNMB-213ENST00000492512 TBC1D5Q92609 795 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 MRPL38Q96DV4 380 aaKnown RBP16.06■□□□□ 0.16
GPNMB-213ENST00000492512 IWS1Q96ST2 819 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 RMDN3Q96TC7 470 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 WDFY4Q6ZS81 3184 aa16.06■□□□□ 0.16
GPNMB-213ENST00000492512 ABCB11O95342 1321 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 F2P00734 622 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 AMHP03971 560 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 ZNF286BP0CG31 522 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 GOLGA8HP0CJ92 632 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 LAMC2Q13753 1193 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 MBTPS1Q14703 1052 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 CDC37Q16543 378 aaPredicted RBP16.05■□□□□ 0.16
GPNMB-213ENST00000492512 TRIM71Q2Q1W2 868 aaKnown RBP16.05■□□□□ 0.16
GPNMB-213ENST00000492512 ARHGEF16Q5VV41 709 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 TRAF7Q6Q0C0 670 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.05■□□□□ 0.16
GPNMB-213ENST00000492512 MCF2L2Q86YR7 1114 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
GPNMB-213ENST00000492512 WNT8BQ93098 351 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 EMID1Q96A84 441 aaPredicted RBP16.05■□□□□ 0.16
GPNMB-213ENST00000492512 UBA5Q9GZZ9 404 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 CPVLQ9H3G5 476 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 HELLSQ9NRZ9 838 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 COL20A1Q9P218 1284 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 DDX41Q9UJV9 622 aaKnown RBP16.05■□□□□ 0.16
GPNMB-213ENST00000492512 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
GPNMB-213ENST00000492512 H3BQ06 376 aaPredicted RBP16.04■□□□□ 0.16
GPNMB-213ENST00000492512 HAS3O00219 553 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 DCXO43602 365 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 MRE11P49959 708 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 HAND2P61296 217 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 ZNF200P98182 395 aaPredicted RBP16.04■□□□□ 0.16
GPNMB-213ENST00000492512 TIGD5Q53EQ6 642 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 MFSD6Q6ZSS7 791 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 EP400NLQ6ZTU2 488 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 DBF4BQ8NFT6 615 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 PPTC7Q8NI37 304 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 NEK9Q8TD19 979 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 EVI5LQ96CN4 794 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 SAMD11Q96NU1 681 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 FAM50BQ9Y247 325 aa16.04■□□□□ 0.16
GPNMB-213ENST00000492512 NLRC5Q86WI3 1866 aa16.03■□□□□ 0.16
GPNMB-213ENST00000492512 TRIOO75962 3097 aa16.03■□□□□ 0.16
GPNMB-213ENST00000492512 RBAK-RBAKDNI3L0D1 243 aa16.03■□□□□ 0.16
GPNMB-213ENST00000492512 EIF3JO75822 258 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms