RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 ADAMTS3O15072 1205 aa29.62■■■□□ 2.33
TTC3-223ENST00000492275 DYNC1LI2O43237 492 aaPredicted RBP29.62■■■□□ 2.33
TTC3-223ENST00000492275 C6orf222P0C671 652 aaPredicted RBP29.62■■■□□ 2.33
TTC3-223ENST00000492275 CCND2P30279 289 aa29.62■■■□□ 2.33
TTC3-223ENST00000492275 MRPS9P82933 396 aaKnown RBP29.62■■■□□ 2.33
TTC3-223ENST00000492275 TLK2Q86UE8 772 aa29.62■■■□□ 2.33
TTC3-223ENST00000492275 TEX2Q8IWB9 1127 aa29.62■■■□□ 2.33
TTC3-223ENST00000492275 GTF3C6Q969F1 213 aa29.62■■■□□ 2.33
TTC3-223ENST00000492275 SENP6Q9GZR1 1112 aaPredicted RBP29.62■■■□□ 2.33
TTC3-223ENST00000492275 ZMYND12Q9H0C1 365 aa29.62■■■□□ 2.33
TTC3-223ENST00000492275 LIMCH1Q9UPQ0 1083 aa29.62■■■□□ 2.33
TTC3-223ENST00000492275 MYH7BA7E2Y1 1941 aa29.62■■■□□ 2.33
TTC3-223ENST00000492275 DEXIO95424 95 aa29.61■■■□□ 2.33
TTC3-223ENST00000492275 TXNP10599 105 aaKnown RBP29.61■■■□□ 2.33
TTC3-223ENST00000492275 CST5P28325 142 aaPredicted RBP29.61■■■□□ 2.33
TTC3-223ENST00000492275 CLK2P49760 499 aaKnown RBP29.61■■■□□ 2.33
TTC3-223ENST00000492275 RABEP1Q15276 862 aa29.61■■■□□ 2.33
TTC3-223ENST00000492275 VPS54Q9P1Q0 977 aa29.61■■■□□ 2.33
TTC3-223ENST00000492275 PHF24Q9UPV7 400 aa29.61■■■□□ 2.33
TTC3-223ENST00000492275 CDKL5O76039 1030 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 ST3GAL1Q11201 340 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 TTLL4Q14679 1199 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 KCNA10Q16322 511 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 COPS5Q92905 334 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 AIFM3Q96NN9 605 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 TSEN34Q9BSV6 310 aaKnown RBP29.6■■■□□ 2.33
TTC3-223ENST00000492275 AP5M1Q9H0R1 490 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 GLT8D2Q9H1C3 349 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 SPC25Q9HBM1 224 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 TMEM260Q9NX78 707 aa29.6■■■□□ 2.33
TTC3-223ENST00000492275 TNRC18O15417 2968 aaPredicted RBP29.59■■■□□ 2.33
TTC3-223ENST00000492275 PDE4DIPQ5VU43 2346 aa29.59■■■□□ 2.33
TTC3-223ENST00000492275 SPDYE3A6NKU9 549 aa29.59■■■□□ 2.33
TTC3-223ENST00000492275 BEX3Q00994 111 aa29.59■■■□□ 2.33
TTC3-223ENST00000492275 LY6KQ17RY6 165 aa29.59■■■□□ 2.33
TTC3-223ENST00000492275 GNASQ5JWF2 1037 aa29.59■■■□□ 2.33
TTC3-223ENST00000492275 PCNX4Q63HM2 1172 aa29.59■■■□□ 2.33
TTC3-223ENST00000492275 CCDC12Q8WUD4 166 aaPredicted RBP29.59■■■□□ 2.33
TTC3-223ENST00000492275 HTATIP2Q9BUP3 242 aa29.59■■■□□ 2.33
TTC3-223ENST00000492275 SH3GLB2Q9NR46 395 aa29.59■■■□□ 2.33
TTC3-223ENST00000492275 DDX41Q9UJV9 622 aaKnown RBP29.59■■■□□ 2.33
TTC3-223ENST00000492275 NKRFO15226 690 aaKnown RBP eCLIP29.58■■■□□ 2.336e-8■■■□□ 18.1
TTC3-223ENST00000492275 FERMT2Q96AC1 680 aa29.58■■■□□ 2.33
TTC3-223ENST00000492275 C6orf50Q9HD87 102 aa29.58■■■□□ 2.33
TTC3-223ENST00000492275 STK36Q9NRP7 1315 aa29.58■■■□□ 2.33
TTC3-223ENST00000492275 RTEL1Q9NZ71 1219 aa29.58■■■□□ 2.33
TTC3-223ENST00000492275 ACLYP53396 1101 aa29.57■■■□□ 2.32
TTC3-223ENST00000492275 XRRA1Q6P2D8 792 aa29.57■■■□□ 2.32
TTC3-223ENST00000492275 PGBD1Q96JS3 809 aa29.57■■■□□ 2.32
TTC3-223ENST00000492275 STAM2O75886 525 aa29.56■■■□□ 2.32
TTC3-223ENST00000492275 FOSP01100 380 aaPredicted RBP29.56■■■□□ 2.32
TTC3-223ENST00000492275 FDPSP14324 419 aaKnown RBP29.56■■■□□ 2.32
TTC3-223ENST00000492275 FSCN1Q16658 493 aaKnown RBP29.56■■■□□ 2.32
TTC3-223ENST00000492275 PCSK9Q8NBP7 692 aaKnown RBP29.56■■■□□ 2.32
TTC3-223ENST00000492275 CCDC148Q8NFR7 591 aa29.56■■■□□ 2.32
TTC3-223ENST00000492275 OR6J1Q8NGC5 347 aa29.56■■■□□ 2.32
TTC3-223ENST00000492275 DPF3Q92784 378 aa29.56■■■□□ 2.32
TTC3-223ENST00000492275 INPP4AQ96PE3 977 aaPredicted RBP29.56■■■□□ 2.32
TTC3-223ENST00000492275 MRVI1Q9Y6F6 885 aa29.56■■■□□ 2.32
TTC3-223ENST00000492275 MOXD2PA6NHM9 499 aa29.55■■■□□ 2.32
TTC3-223ENST00000492275 ASGR1P07306 291 aa29.55■■■□□ 2.32
TTC3-223ENST00000492275 GNA11P29992 359 aa29.55■■■□□ 2.32
TTC3-223ENST00000492275 LRRC26Q2I0M4 334 aa29.55■■■□□ 2.32
TTC3-223ENST00000492275 JAKMIP3Q5VZ66 844 aa29.55■■■□□ 2.32
TTC3-223ENST00000492275 NSUN7Q8NE18 718 aaKnown RBP29.55■■■□□ 2.32
TTC3-223ENST00000492275 ANO3Q9BYT9 981 aa29.55■■■□□ 2.32
TTC3-223ENST00000492275 A0A1W2PQ45 241 aaPredicted RBP29.54■■■□□ 2.32
TTC3-223ENST00000492275 A0A1W2PQY0 241 aa29.54■■■□□ 2.32
TTC3-223ENST00000492275 ATN1P54259 1190 aaPredicted RBP29.54■■■□□ 2.32
TTC3-223ENST00000492275 NLRP5P59047 1200 aa29.54■■■□□ 2.32
TTC3-223ENST00000492275 AP3B2Q13367 1082 aa29.54■■■□□ 2.32
TTC3-223ENST00000492275 SLC39A5Q6ZMH5 540 aa29.54■■■□□ 2.32
TTC3-223ENST00000492275 ZSCAN31Q96LW9 406 aaPredicted RBP29.54■■■□□ 2.32
TTC3-223ENST00000492275 ORC3Q9UBD5 711 aaPredicted RBP29.54■■■□□ 2.32
TTC3-223ENST00000492275 DOCK5Q9H7D0 1870 aa29.53■■■□□ 2.32
TTC3-223ENST00000492275 ICAM3P32942 547 aa29.53■■■□□ 2.32
TTC3-223ENST00000492275 SP2Q02086 613 aa29.53■■■□□ 2.32
TTC3-223ENST00000492275 ARHGAP1Q07960 439 aa29.53■■■□□ 2.32
TTC3-223ENST00000492275 SEMA3FQ13275 785 aa29.53■■■□□ 2.32
TTC3-223ENST00000492275 KCNV1Q6PIU1 500 aa29.53■■■□□ 2.32
TTC3-223ENST00000492275 EHMT1Q9H9B1 1298 aa29.53■■■□□ 2.32
TTC3-223ENST00000492275 SPATA31C2B4DYI2 1134 aa29.52■■■□□ 2.32
TTC3-223ENST00000492275 JAK2O60674 1132 aa29.52■■■□□ 2.32
TTC3-223ENST00000492275 GH1P01241 217 aa29.52■■■□□ 2.32
TTC3-223ENST00000492275 TGFB3P10600 412 aa29.52■■■□□ 2.32
TTC3-223ENST00000492275 CCDC83Q8IWF9 413 aa29.52■■■□□ 2.32
TTC3-223ENST00000492275 REXO1Q8N1G1 1221 aaKnown RBP29.52■■■□□ 2.32
TTC3-223ENST00000492275 RASGRP4Q8TDF6 673 aa29.52■■■□□ 2.32
TTC3-223ENST00000492275 UBIAD1Q9Y5Z9 338 aa29.52■■■□□ 2.32
TTC3-223ENST00000492275 ST18O60284 1047 aa29.51■■■□□ 2.31
TTC3-223ENST00000492275 CD2BP2O95400 341 aaKnown RBP29.51■■■□□ 2.31
TTC3-223ENST00000492275 ITGB5P18084 799 aa29.51■■■□□ 2.31
TTC3-223ENST00000492275 SREBF1P36956 1147 aa29.51■■■□□ 2.31
TTC3-223ENST00000492275 NPY5RQ15761 445 aa29.51■■■□□ 2.31
TTC3-223ENST00000492275 GNPTABQ3T906 1256 aa29.51■■■□□ 2.31
TTC3-223ENST00000492275 IL27Q8NEV9 243 aa29.51■■■□□ 2.31
TTC3-223ENST00000492275 BICD2Q8TD16 824 aa29.51■■■□□ 2.31
TTC3-223ENST00000492275 GJB4Q9NTQ9 266 aa29.51■■■□□ 2.31
TTC3-223ENST00000492275 A6NJR5 290 aa29.5■■■□□ 2.31
TTC3-223ENST00000492275 SNX17Q15036 470 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms