RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 DYNC1LI2O43237 492 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 LMNAP02545 664 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 SMPD1P17405 629 aa13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 OAZ1P54368 228 aa13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 PURAQ00577 322 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 FBXO11Q86XK2 927 aa13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 FAM133AQ8N9E0 248 aa13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 OSBP2Q969R2 916 aa13.93□□□□□ -0.18
CACNA1C-228ENST00000492150 PRDM1O75626 825 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 MS4A1P11836 297 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 RBL2Q08999 1139 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 COASYQ13057 564 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 IQSEC1Q6DN90 963 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 CCDC155Q8N6L0 562 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 CEP95Q96GE4 821 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 EPB41L4AQ9HCS5 686 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 HOMER2Q9NSB8 354 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 MTMR4Q9NYA4 1195 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 RALYQ9UKM9 306 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 DDX19BQ9UMR2 479 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 COG6Q9Y2V7 657 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 PCDHGC5Q9Y5F6 944 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 MYH4Q9Y623 1939 aa13.92□□□□□ -0.18
CACNA1C-228ENST00000492150 SMARCA5O60264 1052 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 SDHBP21912 280 aa13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 PTGS1P23219 599 aa13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 ADAM15Q13444 863 aa13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 IKBKEQ14164 716 aa13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 KIAA0319Q5VV43 1072 aa13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 ASTLQ6HA08 431 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 TMEM192Q8IY95 271 aa13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 LRRC47Q8N1G4 583 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 GMCL1P1Q8NEA9 526 aa13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 SYNPO2Q9UMS6 1093 aa13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 DDX49Q9Y6V7 483 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-228ENST00000492150 FRYLO94915 3013 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 TTLL1O95922 423 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 BMP3P12645 472 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 ATF7P17544 494 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 CLCN5P51795 746 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 RRP1P56182 461 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 SLFN13Q68D06 897 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 ZNF444Q8N0Y2 327 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 KBTBD3Q8NAB2 608 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 MTG1Q9BT17 334 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 ACAD9Q9H845 621 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 A1CFQ9NQ94 594 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 FANCMQ8IYD8 2048 aa13.9□□□□□ -0.18
CACNA1C-228ENST00000492150 ASB14A6NK59 587 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 C5orf67F2Z3F1 127 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 RNF113AO15541 343 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 GPAA1O43292 621 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 NBNO60934 754 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 FDX1P10109 184 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 SELPP16109 830 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 NDUFV1P49821 464 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 RSPO4Q2I0M5 234 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 TMEM63BQ5T3F8 832 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 FAM117BQ6P1L5 589 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 LRRC8DQ7L1W4 858 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 UBALD2Q8IYN6 164 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 NEDD1Q8NHV4 660 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 APPBP2Q92624 585 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 LRRCC1Q9C099 1032 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 PDGFCQ9NRA1 345 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 ECHDC1Q9NTX5 307 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 RNF146Q9NTX7 359 aa13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 SETXQ7Z333 2677 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-228ENST00000492150 PLIN4Q96Q06 1357 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 M0R2C6 588 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 RB1P06400 928 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 ADRB1P08588 477 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 HOXB3P14651 431 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 TDO2P48775 406 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 CPT1AP50416 773 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 TCTN1Q2MV58 587 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 FAM47CQ5HY64 1035 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 TAPT1Q6NXT6 567 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 TRERF1Q96PN7 1200 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 ZNF287Q9HBT7 754 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 SH2B1Q9NRF2 756 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 NOD1Q9Y239 953 aa13.88□□□□□ -0.19
CACNA1C-228ENST00000492150 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 LINC01565O15544 149 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 AMHP03971 560 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 GNAT2P19087 354 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 GTF2F1P35269 517 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 STAT2P52630 851 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 TKFCQ3LXA3 575 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 IFNL3Q8IZI9 196 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 KCNG4Q8TDN1 519 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 GMCL1Q96IK5 515 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 RPGRIP1Q96KN7 1286 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 CLEC1BQ9P126 229 aa13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 USP15Q9Y4E8 981 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-228ENST00000492150 MYO10Q9HD67 2058 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms