RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 A6NJR5 290 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 FGBP02675 491 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 MCM5P33992 734 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 HSPA4P34932 840 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 RABGGTBP53611 331 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 ARHGAP1Q07960 439 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 LY6KQ17RY6 165 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 FAM47CQ5HY64 1035 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 SEPT14Q6ZU15 432 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 FBXO11Q86XK2 927 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 RGS22Q8NE09 1264 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 ATXN2LQ8WWM7 1075 aaKnown RBP12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 MTA3Q9BTC8 594 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 PRDM12Q9H4Q4 367 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 MAD2L2Q9UI95 211 aa12.79□□□□□ -0.36
TMEM39A-211ENST00000491685 REV3LO60673 3130 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 NKRFO15226 690 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 MMP3P08254 477 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 MYOGP15173 224 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 EIF2AK2P19525 551 aaKnown RBP12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 TTLL4Q14679 1199 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 AFG1LQ8WV93 481 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 CTAGE1Q96RT6 745 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 RMDN3Q96TC7 470 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 MAF1Q9H063 256 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 MYO9BQ13459 2157 aa12.78□□□□□ -0.36
TMEM39A-211ENST00000491685 HSD17B4P51659 736 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 CHMP4BP1P59074 171 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 FGD1P98174 961 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 ADGRE1Q14246 886 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 BRDTQ58F21 947 aaPredicted RBP12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 CHST3Q7LGC8 479 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 DEFB128Q7Z7B8 93 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 IL31RAQ8NI17 732 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 NSUN6Q8TEA1 469 aaKnown RBP12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 KAT2BQ92831 832 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 TMEM87BQ96K49 555 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 GPHNQ9NQX3 736 aaPredicted RBP12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 PXMP2Q9NR77 195 aa12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 MRPL11Q9Y3B7 192 aaKnown RBP12.77□□□□□ -0.37
TMEM39A-211ENST00000491685 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 ZBBXA8MT70 800 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 CYTH3O43739 400 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 SORBS3O60504 671 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 CFBP00751 764 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 GH1P01241 217 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 HOXA13P31271 388 aaPredicted RBP12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 ANTXR2P58335 489 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 GHRHRQ02643 423 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 COL9A3Q14050 684 aaPredicted RBP12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 GRM4Q14833 912 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 ARHGEF16Q5VV41 709 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 NFRKBQ6P4R8 1299 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 BLOC1S2Q6QNY1 142 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 DHX32Q7L7V1 743 aaKnown RBP12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 HOMER1Q86YM7 354 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 MCF2L2Q86YR7 1114 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 FAM122AQ96E09 287 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 ZFP91Q96JP5 570 aaPredicted RBP12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 ASB2Q96Q27 587 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 PIGSQ96S52 555 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 THEGQ9P2T0 379 aa12.76□□□□□ -0.37
TMEM39A-211ENST00000491685 ZBTB5O15062 677 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 RGS20O76081 388 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 ARHGEF15O94989 841 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 SUPT20HL2P0C7V6 817 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 ZNF286BP0CG31 522 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 ANAPC15P60006 121 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 WTAPQ15007 396 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 RAB30Q15771 203 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 STXBP2Q15833 593 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 GDF6Q6KF10 455 aaPredicted RBP12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 ADAMTS19Q8TE59 1207 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 PPM1EQ8WY54 764 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.371e-6■■■■■ 44.7
TMEM39A-211ENST00000491685 KCNB2Q92953 911 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 GAS2L1Q99501 681 aaPredicted RBP12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 PDCD2LQ9BRP1 358 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 AMNQ9BXJ7 453 aa12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 MTIF3Q9H2K0 278 aaKnown RBP12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 DDX41Q9UJV9 622 aaKnown RBP12.75□□□□□ -0.37
TMEM39A-211ENST00000491685 SIP14410 1827 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 KPNA6O60684 536 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 NR3C2P08235 984 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 IQCF3P0C7M6 154 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 GPNMBQ14956 572 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms