RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CEP131Q9UPN4 1083 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 WNT7AO00755 349 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 TDP2O95551 362 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 MYCLP12524 364 aaPredicted RBP21.16■□□□□ 0.98
MCF2L-230ENST00000491028 XRCC5P13010 732 aaKnown RBP21.16■□□□□ 0.98
MCF2L-230ENST00000491028 MRPS9P82933 396 aaKnown RBP21.16■□□□□ 0.98
MCF2L-230ENST00000491028 SETQ01105 290 aaPredicted RBP21.16■□□□□ 0.98
MCF2L-230ENST00000491028 DNM1Q05193 864 aaKnown RBP21.16■□□□□ 0.98
MCF2L-230ENST00000491028 PDE4DQ08499 809 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 STXBP2Q15833 593 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 FOXD4L6Q3SYB3 417 aaPredicted RBP21.16■□□□□ 0.98
MCF2L-230ENST00000491028 ANO1Q5XXA6 986 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 MAMDC4Q6UXC1 1216 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 FOXD4L3Q6VB84 417 aaPredicted RBP21.16■□□□□ 0.98
MCF2L-230ENST00000491028 NIPA1Q7RTP0 329 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 TSKSQ9UJT2 592 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 PCDHB6Q9Y5E3 794 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 UBIAD1Q9Y5Z9 338 aa21.16■□□□□ 0.98
MCF2L-230ENST00000491028 SYNGAP1Q96PV0 1343 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 EIF3JO75822 258 aaKnown RBP21.15■□□□□ 0.98
MCF2L-230ENST00000491028 NASPP49321 788 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-230ENST00000491028 PRMT2P55345 433 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 NBR1Q14596 966 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 Q4G0T1 1027 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 CEP55Q53EZ4 464 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 COL13A1Q5TAT6 717 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-230ENST00000491028 OLFML2BQ68BL8 750 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 MXRA8Q9BRK3 442 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 RTEL1Q9NZ71 1219 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 SRRDQ9UH36 339 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 DDX25Q9UHL0 483 aaKnown RBP21.15■□□□□ 0.98
MCF2L-230ENST00000491028 MORC2Q9Y6X9 1032 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-230ENST00000491028 KIAA1217Q5T5P2 1943 aa21.15■□□□□ 0.98
MCF2L-230ENST00000491028 MCM3APO60318 1980 aa21.14■□□□□ 0.98
MCF2L-230ENST00000491028 TCHHQ07283 1943 aa21.14■□□□□ 0.98
MCF2L-230ENST00000491028 FAM86B1E9PN63 330 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 NEMFO60524 1076 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 YEATS4O95619 227 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 FAM86B2P0C5J1 330 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 CYP2B6P20813 491 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 MCM7P33993 719 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 CAP1Q01518 475 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 PRKCZQ05513 592 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 IRF5Q13568 498 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 SF3A1Q15459 793 aaKnown RBP21.14■□□□□ 0.97
MCF2L-230ENST00000491028 ZNF174Q15697 407 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 CLEC17AQ6ZS10 378 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 ARMCX2Q7L311 632 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 NLRX1Q86UT6 975 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 TRMT44Q8IYL2 757 aaKnown RBP21.14■□□□□ 0.97
MCF2L-230ENST00000491028 INPP4AQ96PE3 977 aaPredicted RBP21.14■□□□□ 0.97
MCF2L-230ENST00000491028 GABRQQ9UN88 632 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 CLIC4Q9Y696 253 aa21.14■□□□□ 0.97
MCF2L-230ENST00000491028 IGLV3-22A0A075B6J6 115 aa21.13■□□□□ 0.97
MCF2L-230ENST00000491028 MEIS1O00470 390 aa21.13■□□□□ 0.97
MCF2L-230ENST00000491028 LAD1O00515 517 aa21.13■□□□□ 0.97
MCF2L-230ENST00000491028 NCLP19338 710 aaKnown RBP21.13■□□□□ 0.97
MCF2L-230ENST00000491028 FLT3LGP49771 235 aa21.13■□□□□ 0.97
MCF2L-230ENST00000491028 GNPTABQ3T906 1256 aa21.13■□□□□ 0.97
MCF2L-230ENST00000491028 GPRASP2Q96D09 838 aa21.13■□□□□ 0.97
MCF2L-230ENST00000491028 TINF2Q9BSI4 451 aa21.13■□□□□ 0.97
MCF2L-230ENST00000491028 FTOQ9C0B1 505 aaKnown RBP eCLIP21.13■□□□□ 0.97
MCF2L-230ENST00000491028 SCAND2PQ9GZW5 306 aaPredicted RBP21.13■□□□□ 0.97
MCF2L-230ENST00000491028 JADE2Q9NQC1 790 aa21.13■□□□□ 0.97
MCF2L-230ENST00000491028 TBX3O15119 743 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 SLC37A4O43826 429 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 ITGB5P18084 799 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 PTPAQ15257 358 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 PRR16Q569H4 304 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 PLA2G4DQ86XP0 818 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 LENG9Q96B70 501 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 CDHR1Q96JP9 859 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 GBP4Q96PP9 640 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 VTA1Q9NP79 307 aa21.12■□□□□ 0.97
MCF2L-230ENST00000491028 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-230ENST00000491028 TFIP11Q9UBB9 837 aaKnown RBP21.12■□□□□ 0.97
MCF2L-230ENST00000491028 MAFGO15525 162 aa21.11■□□□□ 0.97
MCF2L-230ENST00000491028 BAG4O95429 457 aaKnown RBP21.11■□□□□ 0.97
MCF2L-230ENST00000491028 ATP2C1P98194 919 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-230ENST00000491028 CEBPZQ03701 1054 aaKnown RBP21.11■□□□□ 0.97
MCF2L-230ENST00000491028 PTGDRQ13258 359 aa21.11■□□□□ 0.97
MCF2L-230ENST00000491028 MTMR1Q13613 665 aa21.11■□□□□ 0.97
MCF2L-230ENST00000491028 SLC39A14Q15043 492 aa21.11■□□□□ 0.97
MCF2L-230ENST00000491028 STK38Q15208 465 aa21.11■□□□□ 0.97
MCF2L-230ENST00000491028 CALCRLQ16602 461 aa21.11■□□□□ 0.97
MCF2L-230ENST00000491028 POTEDQ86YR6 584 aa21.11■□□□□ 0.97
MCF2L-230ENST00000491028 LINC00301Q8NCQ3 95 aa21.11■□□□□ 0.97
MCF2L-230ENST00000491028 FOXN1O15353 648 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 FIBPO43427 364 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 RGS20O76081 388 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 IGHA2P01877 340 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 OR52Z1P0C646 297 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 HSPA1AP0DMV8 641 aaKnown RBP21.1■□□□□ 0.97
MCF2L-230ENST00000491028 HSPA1BP0DMV9 641 aaKnown RBP21.1■□□□□ 0.97
MCF2L-230ENST00000491028 HSPA8P11142 646 aaKnown RBP21.1■□□□□ 0.97
MCF2L-230ENST00000491028 ICAM3P32942 547 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 PRPHP41219 470 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 ARL6IP4Q66PJ3 421 aaKnown RBP21.1■□□□□ 0.97
MCF2L-230ENST00000491028 CYP2W1Q8TAV3 490 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 KCNG4Q8TDN1 519 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms