RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 LMCD1Q9NZU5 365 aa18.02■□□□□ 0.48
SCAMP3-208ENST00000490999 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
SCAMP3-208ENST00000490999 TTC41PQ6P2S7 1318 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 WDR19Q8NEZ3 1342 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 GH1P01241 217 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 GOLGA8HP0CJ92 632 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 ZNF543Q08ER8 600 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 TRAF7Q6Q0C0 670 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.01■□□□□ 0.474e-6■■■■□ 20
SCAMP3-208ENST00000490999 SESTD1Q86VW0 696 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 C7orf31Q8N865 590 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 FBXO22Q8NEZ5 403 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 COL20A1Q9P218 1284 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 GTF2IRD1Q9UHL9 959 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 ANAPC4Q9UJX5 808 aa18.01■□□□□ 0.47
SCAMP3-208ENST00000490999 SIP14410 1827 aa18■□□□□ 0.47
SCAMP3-208ENST00000490999 SORBS3O60504 671 aa18■□□□□ 0.47
SCAMP3-208ENST00000490999 ZNF200P98182 395 aaPredicted RBP18■□□□□ 0.47
SCAMP3-208ENST00000490999 RBL2Q08999 1139 aa18■□□□□ 0.47
SCAMP3-208ENST00000490999 ZNF618Q5T7W0 954 aa18■□□□□ 0.47
SCAMP3-208ENST00000490999 TBC1D5Q92609 795 aa18■□□□□ 0.47
SCAMP3-208ENST00000490999 ABHD14A-ACY1A0A1B0GW23 586 aa17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 PSEN2P49810 448 aa17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 HAND2P61296 217 aa17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 MFSD10Q14728 455 aa17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 TRIM71Q2Q1W2 868 aaKnown RBP17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 MYOCDQ8IZQ8 938 aa17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 MIER1Q8N108 512 aa17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 TAAR1Q96RJ0 339 aa17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
SCAMP3-208ENST00000490999 MRE11P49959 708 aa17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 IKBKEQ14164 716 aa17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 HIC1Q14526 733 aa17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 CDC37Q16543 378 aaPredicted RBP17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 CSPP1Q1MSJ5 1256 aa17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 KIAA0753Q2KHM9 967 aa17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 EP400NLQ6ZTU2 488 aa17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 SYTL5Q8TDW5 730 aaPredicted RBP17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 ANKS1AQ92625 1134 aa17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 UBA5Q9GZZ9 404 aa17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 TRIP12Q14669 1992 aaPredicted RBP17.98■□□□□ 0.47
SCAMP3-208ENST00000490999 C5orf42Q9H799 3197 aa17.97■□□□□ 0.47
SCAMP3-208ENST00000490999 GRXCR2A6NFK2 248 aa17.97■□□□□ 0.47
SCAMP3-208ENST00000490999 FGRP09769 529 aa17.97■□□□□ 0.47
SCAMP3-208ENST00000490999 SNHG28P0DPA3 235 aa17.97■□□□□ 0.47
SCAMP3-208ENST00000490999 EIF2AK2P19525 551 aaKnown RBP17.97■□□□□ 0.47
SCAMP3-208ENST00000490999 MX1P20591 662 aa17.97■□□□□ 0.47
SCAMP3-208ENST00000490999 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
SCAMP3-208ENST00000490999 DGKDQ16760 1214 aa17.97■□□□□ 0.47
SCAMP3-208ENST00000490999 A0A0D9SFI3 127 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 B4DLN1 442 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 LGR5O75473 907 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 F2P00734 622 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 MRPL12P52815 198 aaKnown RBP17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 PTK7Q13308 1070 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 NEK9Q8TD19 979 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 MRPL38Q96DV4 380 aaKnown RBP17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 FAM227BQ96M60 508 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 ZKSCAN3Q9BRR0 538 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 PNMA2Q9UL42 364 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.47
SCAMP3-208ENST00000490999 NEDD4P46934 1319 aa17.96■□□□□ 0.46
SCAMP3-208ENST00000490999 TRIOO75962 3097 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 DCXO43602 365 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 EFCAB14O75071 495 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 PARNO95453 639 aaKnown RBP17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 FGAP02671 866 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 AMHP03971 560 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 ALADP13716 330 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 NHLH1Q02575 133 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 MKRN4PQ13434 485 aaPredicted RBP17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 EPC2Q52LR7 807 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 TCEAL5Q5H9L2 206 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 DHX37Q8IY37 1157 aaKnown RBP17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 DBF4BQ8NFT6 615 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 NSUN6Q8TEA1 469 aaKnown RBP17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 RMDN3Q96TC7 470 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 TCP11L1Q9NUJ3 509 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 DDX41Q9UJV9 622 aaKnown RBP17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 INSL6Q9Y581 213 aa17.95■□□□□ 0.46
SCAMP3-208ENST00000490999 CSPG5O95196 566 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 THPOP40225 353 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 ZP2Q05996 745 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 STXBP2Q15833 593 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 TIGD5Q53EQ6 642 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 ZNF589Q86UQ0 364 aaPredicted RBP17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 SP7Q8TDD2 431 aaPredicted RBP17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 FBXL18Q96ME1 805 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 KATNAL1Q9BW62 490 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 OSBPL7Q9BZF2 842 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 ABCB11O95342 1321 aa17.94■□□□□ 0.46
SCAMP3-208ENST00000490999 HAS3O00219 553 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 CTSHP09668 335 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 HTRA4P83105 476 aaPredicted RBP17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 CLUL1Q15846 466 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 PTPROQ16827 1216 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 ARHGEF16Q5VV41 709 aa17.93■□□□□ 0.46
SCAMP3-208ENST00000490999 BANK1Q8NDB2 785 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms