RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 CDH24Q86UP0 819 aa10.17□□□□□ -0.78
FNDC3B-211ENST00000490832 ZDHHC13Q8IUH4 622 aa10.17□□□□□ -0.78
FNDC3B-211ENST00000490832 RIN3Q8TB24 985 aa10.17□□□□□ -0.78
FNDC3B-211ENST00000490832 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.17□□□□□ -0.78
FNDC3B-211ENST00000490832 NMRK2Q9NPI5 230 aa10.17□□□□□ -0.78
FNDC3B-211ENST00000490832 AFDNP55196 1824 aaKnown RBP10.17□□□□□ -0.78
FNDC3B-211ENST00000490832 COL15A1P39059 1388 aa10.16□□□□□ -0.78
FNDC3B-211ENST00000490832 GTF2F1P35269 517 aaKnown RBP eCLIP10.16□□□□□ -0.78
FNDC3B-211ENST00000490832 NFIXQ14938 502 aa10.16□□□□□ -0.78
FNDC3B-211ENST00000490832 IL17REQ8NFR9 667 aa10.16□□□□□ -0.78
FNDC3B-211ENST00000490832 ARFGEF1Q9Y6D6 1849 aa10.16□□□□□ -0.78
FNDC3B-211ENST00000490832 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
FNDC3B-211ENST00000490832 CARMIL3Q8ND23 1372 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 IGF2BP3O00425 579 aaKnown RBP eCLIP10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 SMAD7O15105 426 aaKnown RBP10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 KCNQ3O43525 872 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 TM4SF1P30408 202 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 PPP2R5EQ16537 467 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 DALRD3Q5D0E6 543 aaKnown RBP10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 UNC5AQ6ZN44 842 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 TTC6Q86TZ1 520 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 ZNF496Q96IT1 587 aaPredicted RBP10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 PHACTR3Q96KR7 559 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 PIM2Q9P1W9 311 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 LEMD3Q9Y2U8 911 aa10.15□□□□□ -0.78
FNDC3B-211ENST00000490832 A0A1W2PQH9 124 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 K7ELQ4 463 aaPredicted RBP10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 HSPA6P17066 643 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 PIP4K2AP48426 406 aaPredicted RBP10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 SFRP5Q5T4F7 317 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 FAM214BQ7L5A3 538 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 TTC5Q8N0Z6 440 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 RNF141Q8WVD5 230 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 DHX38Q92620 1227 aaKnown RBP10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 DHRS1Q96LJ7 313 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 SLC6A18Q96N87 628 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 ACTR10Q9NZ32 417 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 NARFQ9UHQ1 456 aa10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 R3HCC1Q9Y3T6 440 aaKnown RBP10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 SIPA1L3O60292 1781 aaPredicted RBP10.14□□□□□ -0.79
FNDC3B-211ENST00000490832 CLEC3AO75596 197 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 PRKAR2BP31323 418 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 RNF4P78317 190 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 TEFQ10587 303 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 C22orf34Q6ZV56 151 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 CKAP2LQ8IYA6 745 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 UBXN4Q92575 508 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 HEXIM2Q96MH2 286 aaKnown RBP10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 KREMEN1Q96MU8 473 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 ASPNQ9BXN1 380 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 RNF181Q9P0P0 153 aa10.13□□□□□ -0.79
FNDC3B-211ENST00000490832 PRAMEF22A3QJZ6 481 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 FAM86C2PA6NEL3 165 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 GNAT3A8MTJ3 354 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 SERPINB2P05120 415 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 KIR3DL1P43629 444 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 HTRA3P83110 453 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 ZYXQ15942 572 aaKnown RBP10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 ANKS3Q6ZW76 656 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 PHAXQ9H814 394 aaKnown RBP10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 MKNK2Q9HBH9 465 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 SBF1O95248 1867 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 NPC1L1Q9UHC9 1359 aa10.12□□□□□ -0.79
FNDC3B-211ENST00000490832 ANKRD31Q8N7Z5 1873 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 NRXN2Q9P2S2 1712 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 PRR19A6NJB7 356 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 CYP26A1O43174 497 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 A1BGP04217 495 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 PRELPP51888 382 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 EIF5P55010 431 aaKnown RBP10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 DCTN1Q14203 1278 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 TBC1D9BQ66K14 1250 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 ZNF790Q6PG37 636 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 MCM10Q7L590 875 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 C2CD5Q86YS7 1000 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 TMEM192Q8IY95 271 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 SUCOQ9UBS9 1254 aaKnown RBP10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 HEG1Q9ULI3 1381 aa10.11□□□□□ -0.79
FNDC3B-211ENST00000490832 SCN7AQ01118 1682 aa10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 STARD3NLO95772 234 aa10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 ZNF865P0CJ78 1059 aaPredicted RBP10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 U2AF1L5P0DN76 240 aaPredicted RBP10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 PPP2R1AP30153 589 aa10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 PMS1P54277 932 aaKnown RBP10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 U2AF1Q01081 240 aaKnown RBP eCLIP10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 HNRNPLLQ8WVV9 542 aaKnown RBP10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 FBXL18Q96ME1 805 aa10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 TNKS2Q9H2K2 1166 aa10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 LRRC4CQ9HCJ2 640 aa10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 COL11A2P13942 1736 aaPredicted RBP10.1□□□□□ -0.79
FNDC3B-211ENST00000490832 DLEC1Q9Y238 1755 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 CCDC88AQ3V6T2 1871 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 BTBD11A6QL63 1104 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 TGFB1P01137 390 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 FOSL1P15407 271 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 OXCT1P55809 520 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 RBL2Q08999 1139 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 BBS9Q3SYG4 887 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 MFSD4AQ8N468 514 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 VWCEQ96DN2 955 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms