RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CMTR1Q8N1G2 835 aaKnown RBP36.26■■■■□ 3.4
LDB1-204ENST00000490751 TMEM199Q8N511 208 aa36.26■■■■□ 3.4
LDB1-204ENST00000490751 IL31RAQ8NI17 732 aa36.26■■■■□ 3.4
LDB1-204ENST00000490751 AFG1LQ8WV93 481 aa36.26■■■■□ 3.4
LDB1-204ENST00000490751 HIPK3Q9H422 1215 aa36.26■■■■□ 3.4
LDB1-204ENST00000490751 CYP2C18P33260 490 aa36.25■■■■□ 3.39
LDB1-204ENST00000490751 MMP3P08254 477 aa36.24■■■■□ 3.39
LDB1-204ENST00000490751 CSF2RAP15509 400 aa36.24■■■■□ 3.39
LDB1-204ENST00000490751 ADCK5Q3MIX3 580 aa36.24■■■■□ 3.39
LDB1-204ENST00000490751 TSGA10IPQ3SY00 556 aa36.24■■■■□ 3.39
LDB1-204ENST00000490751 VSIG10LQ86VR7 867 aa36.24■■■■□ 3.39
LDB1-204ENST00000490751 MICU3Q86XE3 530 aa36.24■■■■□ 3.39
LDB1-204ENST00000490751 TCEANC2Q96MN5 208 aa36.24■■■■□ 3.39
LDB1-204ENST00000490751 NBPF20Q3BBV1 942 aa36.23■■■■□ 3.39
LDB1-204ENST00000490751 FAM47CQ5HY64 1035 aa36.23■■■■□ 3.39
LDB1-204ENST00000490751 TRMT13Q9NUP7 481 aaKnown RBP36.23■■■■□ 3.39
LDB1-204ENST00000490751 MYH7BA7E2Y1 1941 aa36.23■■■■□ 3.39
LDB1-204ENST00000490751 UMODL1Q5DID0 1318 aa36.23■■■■□ 3.39
LDB1-204ENST00000490751 RGS20O76081 388 aa36.22■■■■□ 3.39
LDB1-204ENST00000490751 CCND2P30279 289 aa36.22■■■■□ 3.39
LDB1-204ENST00000490751 EXOSC10Q01780 885 aaKnown RBP36.22■■■■□ 3.39
LDB1-204ENST00000490751 KRT32Q14532 448 aa36.22■■■■□ 3.39
LDB1-204ENST00000490751 DHX32Q7L7V1 743 aaKnown RBP36.22■■■■□ 3.39
LDB1-204ENST00000490751 FANCBQ8NB91 859 aa36.22■■■■□ 3.39
LDB1-204ENST00000490751 PPP1R13LQ8WUF5 828 aa36.22■■■■□ 3.39
LDB1-204ENST00000490751 BUD13Q9BRD0 619 aaKnown RBP eCLIP36.22■■■■□ 3.393e-9■■□□□ 12
LDB1-204ENST00000490751 NOC4LQ9BVI4 516 aaKnown RBP36.22■■■■□ 3.39
LDB1-204ENST00000490751 LAMA2P24043 3122 aaKnown RBP36.21■■■■□ 3.39
LDB1-204ENST00000490751 SYNE3Q6ZMZ3 975 aa36.21■■■■□ 3.39
LDB1-204ENST00000490751 ZFP91Q96JP5 570 aaPredicted RBP36.21■■■■□ 3.39
LDB1-204ENST00000490751 TMTC3Q6ZXV5 915 aa36.2■■■■□ 3.39
LDB1-204ENST00000490751 MTMR10Q9NXD2 777 aa36.2■■■■□ 3.39
LDB1-204ENST00000490751 FRMPD4Q14CM0 1322 aa36.19■■■■□ 3.38
LDB1-204ENST00000490751 SUPT20HL2P0C7V6 817 aa36.19■■■■□ 3.38
LDB1-204ENST00000490751 NFRKBQ6P4R8 1299 aa36.19■■■■□ 3.38
LDB1-204ENST00000490751 KCNV1Q6PIU1 500 aa36.19■■■■□ 3.38
LDB1-204ENST00000490751 APOA5Q6Q788 366 aa36.19■■■■□ 3.38
LDB1-204ENST00000490751 C16orf59Q7L2K0 433 aa36.19■■■■□ 3.38
LDB1-204ENST00000490751 CCDC82Q8N4S0 544 aa36.19■■■■□ 3.38
LDB1-204ENST00000490751 EMID1Q96A84 441 aaPredicted RBP36.19■■■■□ 3.38
LDB1-204ENST00000490751 ACRP10323 421 aa36.18■■■■□ 3.38
LDB1-204ENST00000490751 CHMP4BP1P59074 171 aa36.18■■■■□ 3.38
LDB1-204ENST00000490751 SMAD3P84022 425 aaKnown RBP36.18■■■■□ 3.38
LDB1-204ENST00000490751 LAMC2Q13753 1193 aa36.18■■■■□ 3.38
LDB1-204ENST00000490751 TMEM240Q5SV17 173 aa36.18■■■■□ 3.38
LDB1-204ENST00000490751 FAM109BQ6ICB4 259 aaPredicted RBP36.18■■■■□ 3.38
LDB1-204ENST00000490751 DHX37Q8IY37 1157 aaKnown RBP36.18■■■■□ 3.38
LDB1-204ENST00000490751 SMARCC2Q8TAQ2 1214 aa36.18■■■■□ 3.38
LDB1-204ENST00000490751 CUL5Q93034 780 aa36.18■■■■□ 3.38
LDB1-204ENST00000490751 hCG_1642624A0A1W2PR95 340 aa36.17■■■■□ 3.38
LDB1-204ENST00000490751 CYP2C9P11712 490 aa36.17■■■■□ 3.38
LDB1-204ENST00000490751 CASTP20810 708 aaKnown RBP36.17■■■■□ 3.38
LDB1-204ENST00000490751 CCL23P55773 120 aa36.17■■■■□ 3.38
LDB1-204ENST00000490751 USP17L6PQ6QN14 398 aa36.17■■■■□ 3.38
LDB1-204ENST00000490751 PTPN11Q06124 597 aaPredicted RBP36.16■■■■□ 3.38
LDB1-204ENST00000490751 DGKDQ16760 1214 aa36.16■■■■□ 3.38
LDB1-204ENST00000490751 PSRC1Q6PGN9 363 aaPredicted RBP36.16■■■■□ 3.38
LDB1-204ENST00000490751 WNT8AQ9H1J5 351 aa36.16■■■■□ 3.38
LDB1-204ENST00000490751 IL23AQ9NPF7 189 aa36.16■■■■□ 3.38
LDB1-204ENST00000490751 BRPF3Q9ULD4 1205 aa36.16■■■■□ 3.38
LDB1-204ENST00000490751 PIK3CDO00329 1044 aa36.15■■■■□ 3.38
LDB1-204ENST00000490751 ZNF697Q5TEC3 545 aa36.15■■■■□ 3.38
LDB1-204ENST00000490751 PPTC7Q8NI37 304 aa36.15■■■■□ 3.38
LDB1-204ENST00000490751 MEIS2O14770 477 aa36.14■■■■□ 3.38
LDB1-204ENST00000490751 ZBTB43O43298 467 aa36.14■■■■□ 3.38
LDB1-204ENST00000490751 SORBS3O60504 671 aa36.14■■■■□ 3.38
LDB1-204ENST00000490751 GGPS1O95749 300 aa36.14■■■■□ 3.38
LDB1-204ENST00000490751 HMGB1P09429 215 aaKnown RBP36.14■■■■□ 3.38
LDB1-204ENST00000490751 UBA1P22314 1058 aaKnown RBP36.14■■■■□ 3.38
LDB1-204ENST00000490751 MRPS9P82933 396 aaKnown RBP36.14■■■■□ 3.38
LDB1-204ENST00000490751 ZNF365Q70YC5 407 aa36.14■■■■□ 3.38
LDB1-204ENST00000490751 KAT2BQ92831 832 aa36.14■■■■□ 3.38
LDB1-204ENST00000490751 GPKOWQ92917 476 aaPredicted RBP eCLIP36.14■■■■□ 3.38
LDB1-204ENST00000490751 KCNB2Q92953 911 aa36.14■■■■□ 3.38
LDB1-204ENST00000490751 RBM28Q9NW13 759 aaKnown RBP36.14■■■■□ 3.38
LDB1-204ENST00000490751 TGFB3P10600 412 aa36.13■■■■□ 3.37
LDB1-204ENST00000490751 HSPA4P34932 840 aa36.13■■■■□ 3.37
LDB1-204ENST00000490751 SP2Q02086 613 aa36.13■■■■□ 3.37
LDB1-204ENST00000490751 CELF3Q5SZQ8 465 aaKnown RBP36.13■■■■□ 3.37
LDB1-204ENST00000490751 MYSM1Q5VVJ2 828 aa36.13■■■■□ 3.37
LDB1-204ENST00000490751 FAM161BQ96MY7 647 aa36.13■■■■□ 3.37
LDB1-204ENST00000490751 CNTNAP5Q8WYK1 1306 aa36.12■■■■□ 3.37
LDB1-204ENST00000490751 RTN1Q16799 776 aa36.12■■■■□ 3.37
LDB1-204ENST00000490751 GNPTABQ3T906 1256 aa36.12■■■■□ 3.37
LDB1-204ENST00000490751 SCLYQ96I15 445 aa36.12■■■■□ 3.37
LDB1-204ENST00000490751 PSTPIP2Q9H939 334 aa36.12■■■■□ 3.37
LDB1-204ENST00000490751 KLF18A0A0U1RQI7 1052 aa36.11■■■■□ 3.37
LDB1-204ENST00000490751 STAM2O75886 525 aa36.11■■■■□ 3.37
LDB1-204ENST00000490751 CPA1P15085 419 aa36.11■■■■□ 3.37
LDB1-204ENST00000490751 SPATA33Q96N06 139 aa36.11■■■■□ 3.37
LDB1-204ENST00000490751 JAKMIP1Q96N16 626 aaKnown RBP36.11■■■■□ 3.37
LDB1-204ENST00000490751 INPP4AQ96PE3 977 aaPredicted RBP36.11■■■■□ 3.37
LDB1-204ENST00000490751 SNX14Q9Y5W7 946 aa36.11■■■■□ 3.37
LDB1-204ENST00000490751 HSFX4A0A1B0GTS1 333 aaPredicted RBP36.1■■■■□ 3.37
LDB1-204ENST00000490751 HSFX3A0A1B0GWH4 333 aaPredicted RBP36.1■■■■□ 3.37
LDB1-204ENST00000490751 REC8O95072 547 aa36.1■■■■□ 3.37
LDB1-204ENST00000490751 ZNF286BP0CG31 522 aa36.1■■■■□ 3.37
LDB1-204ENST00000490751 HSDL1Q3SXM5 330 aa36.1■■■■□ 3.37
LDB1-204ENST00000490751 RASIP1Q5U651 963 aa36.1■■■■□ 3.37
LDB1-204ENST00000490751 HEATR3Q7Z4Q2 680 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms