RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	C7orf61	Q8IZ16	206 aa		21.34	■■□□□ 1.01
C4A-256	ENST00000490663	KLHDC9	Q8NEP7	349 aa		21.34	■■□□□ 1.01
C4A-256	ENST00000490663	IWS1	Q96ST2	819 aa		21.34	■■□□□ 1.01
C4A-256	ENST00000490663	RNF26	Q9BY78	433 aa	Predicted RBP	21.34	■■□□□ 1.01
C4A-256	ENST00000490663	MAF1	Q9H063	256 aa		21.34	■■□□□ 1.01
C4A-256	ENST00000490663	PIK3CD	O00329	1044 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	TXN	P10599	105 aa	Known RBP	21.33	■■□□□ 1.01
C4A-256	ENST00000490663	CCND2	P30279	289 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	RBM25	P49756	843 aa	Known RBP	21.33	■■□□□ 1.01
C4A-256	ENST00000490663	MRPS9	P82933	396 aa	Known RBP	21.33	■■□□□ 1.01
C4A-256	ENST00000490663	ST3GAL1	Q11201	340 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	ANKRD1	Q15327	319 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	DUSP28	Q4G0W2	176 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	PPP1R18	Q6NYC8	613 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	SAMD3	Q8N6K7	520 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	OR6J1	Q8NGC5	347 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	SCFD2	Q8WU76	684 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	HTATIP2	Q9BUP3	242 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	RIC8A	Q9NPQ8	531 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	RTEL1	Q9NZ71	1219 aa		21.33	■■□□□ 1.01
C4A-256	ENST00000490663	SCN5A	Q14524	2016 aa		21.33	■■□□□ 1
C4A-256	ENST00000490663		A0A1W2PQ45	241 aa	Predicted RBP	21.32	■■□□□ 1
C4A-256	ENST00000490663		A0A1W2PQY0	241 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	CTDNEP1	O95476	244 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	GNAS	Q5JWF2	1037 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	JAKMIP3	Q5VZ66	844 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	RASGRP4	Q8TDF6	673 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	AP5M1	Q9H0R1	490 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	PCDHA6	Q9UN73	950 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	PHF24	Q9UPV7	400 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	PCDHA8	Q9Y5H6	950 aa		21.32	■■□□□ 1
C4A-256	ENST00000490663	LOXHD1	Q8IVV2	1947 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	hCG_1984214	I3L0E3	225 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	ASGR1	P07306	291 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	CAPN2	P17655	700 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	ACLY	P53396	1101 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	FOSB	P53539	338 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	TTLL4	Q14679	1199 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	CCSAP	Q6IQ19	270 aa	Predicted RBP	21.31	■■□□□ 1
C4A-256	ENST00000490663	CCDC62	Q6P9F0	684 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	VSIG10L	Q86VR7	867 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	TRIM22	Q8IYM9	498 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	ZNF713	Q8N859	430 aa	Predicted RBP	21.31	■■□□□ 1
C4A-256	ENST00000490663	PPP1R13L	Q8WUF5	828 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	GTF3C6	Q969F1	213 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	SPC25	Q9HBM1	224 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	MRVI1	Q9Y6F6	885 aa		21.31	■■□□□ 1
C4A-256	ENST00000490663	SPDYE3	A6NKU9	549 aa		21.3	■■□□□ 1
C4A-256	ENST00000490663	EIF3J	O75822	258 aa	Known RBP	21.3	■■□□□ 1
C4A-256	ENST00000490663	FSCN1	Q16658	493 aa	Known RBP	21.3	■■□□□ 1
C4A-256	ENST00000490663	ANO3	Q9BYT9	981 aa		21.3	■■□□□ 1
C4A-256	ENST00000490663	BCAS3	Q9H6U6	928 aa		21.3	■■□□□ 1
C4A-256	ENST00000490663	UPF2	Q9HAU5	1272 aa	Known RBP	21.3	■■□□□ 1
C4A-256	ENST00000490663	GJB4	Q9NTQ9	266 aa		21.3	■■□□□ 1
C4A-256	ENST00000490663	ATP11B	Q9Y2G3	1177 aa		21.3	■■□□□ 1
C4A-256	ENST00000490663	EVI5	O60447	810 aa		21.29	■■□□□ 1
C4A-256	ENST00000490663	CST5	P28325	142 aa	Predicted RBP	21.29	■■□□□ 1
C4A-256	ENST00000490663	RTP1	P59025	263 aa		21.29	■■□□□ 1
C4A-256	ENST00000490663	CPLX2	Q6PUV4	134 aa	Known RBP	21.29	■■□□□ 1
C4A-256	ENST00000490663	CXCL17	Q6UXB2	119 aa		21.29	■■□□□ 1
C4A-256	ENST00000490663	BACH2	Q9BYV9	841 aa		21.29	■■□□□ 1
C4A-256	ENST00000490663	RBM27	Q9P2N5	1060 aa	Known RBP	21.29	■■□□□ 1
C4A-256	ENST00000490663	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	21.29	■■□□□ 1
C4A-256	ENST00000490663	TANC1	Q9C0D5	1861 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	JAK2	O60674	1132 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	DEXI	O95424	95 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	MYL3	P08590	195 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	SYN1	P17600	705 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	CLK2	P49760	499 aa	Known RBP	21.28	■■□□□ 1
C4A-256	ENST00000490663	SP2	Q02086	613 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	ARHGAP1	Q07960	439 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	SEMA3F	Q13275	785 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	TRIM60	Q495X7	471 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	SLC39A5	Q6ZMH5	540 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	TBC1D32	Q96NH3	1257 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	PKD2L1	Q9P0L9	805 aa		21.28	■■□□□ 1
C4A-256	ENST00000490663	DDX41	Q9UJV9	622 aa	Known RBP	21.28	■■□□□ 1
C4A-256	ENST00000490663		H0YGN5	161 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	CD2BP2	O95400	341 aa	Known RBP	21.27	■■□□□ 1
C4A-256	ENST00000490663	UBA1	P22314	1058 aa	Known RBP	21.27	■■□□□ 1
C4A-256	ENST00000490663	PSMC6	P62333	389 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	PCNX4	Q63HM2	1172 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	CCDC83	Q8IWF9	413 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	VTI1A	Q96AJ9	217 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	TSEN34	Q9BSV6	310 aa	Known RBP	21.27	■■□□□ 1
C4A-256	ENST00000490663	ZMYND12	Q9H0C1	365 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	STARD7	Q9NQZ5	370 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	KCNJ14	Q9UNX9	436 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	EVPL	Q92817	2033 aa		21.27	■■□□□ 1
C4A-256	ENST00000490663	ESYT2	A0FGR8	921 aa		21.26	■□□□□ 0.99
C4A-256	ENST00000490663	GH1	P01241	217 aa		21.26	■□□□□ 0.99
C4A-256	ENST00000490663	PCSK9	Q8NBP7	692 aa	Known RBP	21.26	■□□□□ 0.99
C4A-256	ENST00000490663	NSUN7	Q8NE18	718 aa	Known RBP	21.26	■□□□□ 0.99
C4A-256	ENST00000490663	AFG1L	Q8WV93	481 aa		21.26	■□□□□ 0.99
C4A-256	ENST00000490663	UIMC1	Q96RL1	719 aa		21.26	■□□□□ 0.99
C4A-256	ENST00000490663	C6orf50	Q9HD87	102 aa		21.26	■□□□□ 0.99
C4A-256	ENST00000490663	ORC3	Q9UBD5	711 aa	Predicted RBP	21.26	■□□□□ 0.99
C4A-256	ENST00000490663	TELO2	Q9Y4R8	837 aa		21.26	■□□□□ 0.99
C4A-256	ENST00000490663	STK36	Q9NRP7	1315 aa		21.26	■□□□□ 0.99
C4A-256	ENST00000490663	MOXD2P	A6NHM9	499 aa		21.25	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms