RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 KLRC3Q07444 240 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 FTSJ3Q8IY81 847 aaKnown RBP10.77□□□□□ -0.69
SRRM1-217ENST00000490543 CCDC144CPQ8IYA2 1237 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 ANKRD35Q8N283 1001 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 PRPF38AQ8NAV1 312 aaKnown RBP10.77□□□□□ -0.69
SRRM1-217ENST00000490543 SLC43A3Q8NBI5 491 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 IL27Q8NEV9 243 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.77□□□□□ -0.69
SRRM1-217ENST00000490543 GPKOWQ92917 476 aaPredicted RBP eCLIP10.77□□□□□ -0.691e-32■■■□□ 14.7
SRRM1-217ENST00000490543 TRPV6Q9H1D0 765 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 BOLA2Q9H3K6 86 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 SPC25Q9HBM1 224 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 SLC4A4Q9Y6R1 1079 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 REV3LO60673 3130 aa10.77□□□□□ -0.69
SRRM1-217ENST00000490543 RFXAPO00287 272 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 ATP2A1O14983 1001 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 NKX3-2P78367 333 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 NR6A1Q15406 480 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 TMEM63BQ5T3F8 832 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 TRIM46Q7Z4K8 759 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 NOC4LQ9BVI4 516 aaKnown RBP10.76□□□□□ -0.69
SRRM1-217ENST00000490543 PUS7LQ9H0K6 701 aaKnown RBP10.76□□□□□ -0.69
SRRM1-217ENST00000490543 WNT8AQ9H1J5 351 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 HIPK3Q9H422 1215 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 EPHX3Q9H6B9 360 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 PAG1Q9NWQ8 432 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 ZBED9Q6R2W3 1325 aa10.76□□□□□ -0.69
SRRM1-217ENST00000490543 B4GALT4O60513 344 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 ZBED4O75132 1171 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 IFIT2P09913 472 aaKnown RBP10.75□□□□□ -0.69
SRRM1-217ENST00000490543 TIMP2P16035 220 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 RASA1P20936 1047 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 GRM5P41594 1212 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 PSMC6P62333 389 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 TNFAIP2Q03169 654 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 ITGA7Q13683 1181 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 KRT40Q6A162 431 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 NOL8Q76FK4 1167 aaKnown RBP10.75□□□□□ -0.69
SRRM1-217ENST00000490543 AMOTL1Q8IY63 956 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 CLASRPQ8N2M8 674 aaKnown RBP10.75□□□□□ -0.69
SRRM1-217ENST00000490543 SCLYQ96I15 445 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 C1QTNF1Q9BXJ1 281 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 CERS4Q9HA82 394 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 HOMER2Q9NSB8 354 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 NYAP2Q9P242 653 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 FKBPLQ9UIM3 349 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 GNEQ9Y223 722 aaKnown RBP10.75□□□□□ -0.69
SRRM1-217ENST00000490543 SLC4A7Q9Y6M7 1214 aa10.75□□□□□ -0.69
SRRM1-217ENST00000490543 EPOPA6NHQ4 379 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 RFC5P40937 340 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 WDR4P57081 412 aaKnown RBP10.74□□□□□ -0.69
SRRM1-217ENST00000490543 UBE3CQ15386 1083 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 FSCN1Q16658 493 aaKnown RBP10.74□□□□□ -0.69
SRRM1-217ENST00000490543 HSP90AB4PQ58FF6 505 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 SIRT2Q8IXJ6 389 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 FAM133AQ8N9E0 248 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 CHST13Q8NET6 341 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 PANK1Q8TE04 598 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 KIF1BPQ96EK5 621 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 LRFN3Q9BTN0 628 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 KLF16Q9BXK1 252 aaPredicted RBP10.74□□□□□ -0.69
SRRM1-217ENST00000490543 MTIF3Q9H2K0 278 aaKnown RBP10.74□□□□□ -0.69
SRRM1-217ENST00000490543 PDGFCQ9NRA1 345 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 CTDP1Q9Y5B0 961 aaPredicted RBP10.74□□□□□ -0.69
SRRM1-217ENST00000490543 PCDHA11Q9Y5I1 949 aa10.74□□□□□ -0.69
SRRM1-217ENST00000490543 GREB1LQ9C091 1923 aaPredicted RBP10.74□□□□□ -0.69
SRRM1-217ENST00000490543 PIEZO1Q92508 2521 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 IGKV6D-41A0A0C4DH26 115 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 ZBBXA8MT70 800 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 ERC2O15083 957 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 DYNC1LI2O43237 492 aaPredicted RBP10.73□□□□□ -0.69
SRRM1-217ENST00000490543 NR3C2P08235 984 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 ATP2A2P16615 1042 aaKnown RBP10.73□□□□□ -0.69
SRRM1-217ENST00000490543 ATP5JP18859 108 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 NR5A1Q13285 461 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 TTLL4Q14679 1199 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 PCMTD1Q96MG8 357 aaPredicted RBP10.73□□□□□ -0.69
SRRM1-217ENST00000490543 STRBPQ96SI9 672 aaKnown RBP10.73□□□□□ -0.69
SRRM1-217ENST00000490543 HAUS7Q99871 368 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.73□□□□□ -0.699e-22■■□□□ 12.3
SRRM1-217ENST00000490543 MKNK2Q9HBH9 465 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 FBXO40Q9UH90 709 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 MTCH2Q9Y6C9 303 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 BRWD1Q9NSI6 2320 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 XIRP2A4UGR9 3374 aa10.73□□□□□ -0.69
SRRM1-217ENST00000490543 TRANK1O15050 2925 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 GSG1L2A8MUP6 293 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 MINDY4BA8MYZ0 360 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 PRDM1O75626 825 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 CABYRO75952 493 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 ARHGEF15O94989 841 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 CA3P07451 260 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 CYP2C9P11712 490 aa10.72□□□□□ -0.69
SRRM1-217ENST00000490543 SBK1Q52WX2 424 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms