RNA–Protein interactions for RNA: ENST00000490540.1

ASIC3-208, Transcript of acid sensing ion channel subunit 3, human

TSL 2

Gene ASIC3, Length 520 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC3-208	ENST00000490540	MRPL12	P52815	198 aa	Known RBP	13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	SART3	Q15020	963 aa	Known RBP	13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	LY6K	Q17RY6	165 aa		13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	ARHGEF16	Q5VV41	709 aa		13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	IGDCC4	Q8TDY8	1250 aa		13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	NSUN6	Q8TEA1	469 aa	Known RBP	13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	ZFP91	Q96JP5	570 aa	Predicted RBP	13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	LY9	Q9HBG7	655 aa		13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	ANO2	Q9NQ90	1003 aa		13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	PXMP2	Q9NR77	195 aa		13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	POLR3E	Q9NVU0	708 aa		13.92	□□□□□ -0.18
ASIC3-208	ENST00000490540	NKRF	O15226	690 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	CYP2C9	P11712	490 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	MYOG	P15173	224 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	HSD17B4	P51659	736 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	CHMP4BP1	P59074	171 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	TTLL4	Q14679	1199 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	STXBP2	Q15833	593 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	FAM47C	Q5HY64	1035 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	CREB3L3	Q68CJ9	461 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	CCDC62	Q6P9F0	684 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	CATIP	Q7Z7H3	387 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	RAB11FIP4	Q86YS3	637 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	ZNF654	Q8IZM8	581 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	IL31RA	Q8NI17	732 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	AFG1L	Q8WV93	481 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	NECAB3	Q96P71	396 aa	Predicted RBP	13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	MTG1	Q9BT17	334 aa	Predicted RBP	13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	NOC4L	Q9BVI4	516 aa	Known RBP	13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	RIOX1	Q9H6W3	641 aa		13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540	TRMT13	Q9NUP7	481 aa	Known RBP	13.91	□□□□□ -0.18
ASIC3-208	ENST00000490540		A6NJR5	290 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	ZBBX	A8MT70	800 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	SORBS3	O60504	671 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	NR3C2	P08235	984 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	MYCL	P12524	364 aa	Predicted RBP	13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	RXRA	P19793	462 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	ARHGAP1	Q07960	439 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	NBPF20	Q3BBV1	942 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	PPP2R2D	Q66LE6	453 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	CASC1	Q6TDU7	716 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	SCLY	Q96I15	445 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	IWS1	Q96ST2	819 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	LRRC2	Q9BYS8	371 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	MAF1	Q9H063	256 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	WNT8A	Q9H1J5	351 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	SLC4A7	Q9Y6M7	1214 aa		13.9	□□□□□ -0.18
ASIC3-208	ENST00000490540	SH2B2	O14492	632 aa	Predicted RBP	13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	PLEKHA8P1	O95397	391 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	GH1	P01241	217 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	MMP3	P08254	477 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	GHRHR	Q02643	423 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	TFF2	Q03403	129 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	NECTIN1	Q15223	517 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	SKIV2L	Q15477	1246 aa	Known RBP	13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	BRDT	Q58F21	947 aa	Predicted RBP	13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	BMP2KL	Q5H9B9	411 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	NFXL1	Q6ZNB6	911 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	FCHSD1	Q86WN1	690 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	CMTR1	Q8N1G2	835 aa	Known RBP	13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	PDCD2L	Q9BRP1	358 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	MRVI1	Q9Y6F6	885 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	CHD9	Q3L8U1	2897 aa		13.89	□□□□□ -0.19
ASIC3-208	ENST00000490540	PNMA6F	A0A0J9YX94	578 aa		13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	RBAK-RBAKDN	I3L0D1	243 aa		13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	EIF3J	O75822	258 aa	Known RBP	13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	DDAH1	O94760	285 aa		13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	MCM5	P33992	734 aa		13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	PGM5	Q15124	567 aa		13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	CTCFL	Q8NI51	663 aa	Predicted RBP	13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	CERS4	Q9HA82	394 aa		13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	DDX41	Q9UJV9	622 aa	Known RBP	13.88	□□□□□ -0.19
ASIC3-208	ENST00000490540	CCDC69	A6NI79	296 aa		13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	RFXAP	O00287	272 aa		13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	RGS20	O76081	388 aa		13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	POLR2M	P0CAP2	368 aa		13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	ATP2A2	P16615	1042 aa	Known RBP	13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	DEFB128	Q7Z7B8	93 aa		13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	RPUSD2	Q8IZ73	545 aa	Known RBP	13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	SEZ6L	Q9BYH1	1024 aa		13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	PCDHA11	Q9Y5I1	949 aa		13.87	□□□□□ -0.19
ASIC3-208	ENST00000490540	hCG_1642624	A0A1W2PR95	340 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	KPNA6	O60684	536 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	ZNF286B	P0CG31	522 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	KIF5B	P33176	963 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	KCNQ1	P51787	676 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	SRBD1	Q8N5C6	995 aa	Known RBP	13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	KAT2B	Q92831	832 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	VWCE	Q96DN2	955 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	RRP36	Q96EU6	259 aa	Known RBP	13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	TMEM87B	Q96K49	555 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	TCEANC2	Q96MN5	208 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	SPZ1	Q9BXG8	430 aa		13.86	□□□□□ -0.19
ASIC3-208	ENST00000490540	CDC45	O75419	566 aa		13.85	□□□□□ -0.19
ASIC3-208	ENST00000490540	CENPB	P07199	599 aa	Predicted RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms