RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 SDE2Q6IQ49 451 aa6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 RPTNQ6XPR3 784 aa6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 MAMDC2Q7Z304 686 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 FGD2Q7Z6J4 655 aa6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 MTDHQ86UE4 582 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 BHLHE22Q8NFJ8 381 aaPredicted RBP6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 APPBP2Q92624 585 aa6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 SCLYQ96I15 445 aa6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 PPP1R16BQ96T49 567 aa6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 TMA7Q9Y2S6 64 aaKnown RBP6.62□□□□□ -1.35
PRPF4B-207ENST00000490399 CCDC163A0A0D9SF12 145 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 F8W031 263 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 RASGRP1O95267 797 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 TSPAN15O95858 294 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 GTF2A2P52657 109 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 WWC2Q6AWC2 1192 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 C16orf86Q6ZW13 317 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 BRAPQ7Z569 592 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 CILP2Q8IUL8 1156 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 BCAS3Q9H6U6 928 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 IPPKQ9H8X2 491 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 KLHL14Q9P2G3 628 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 SFMBT1Q9UHJ3 866 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
PRPF4B-207ENST00000490399 AQP7O14520 342 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 PLD2O14939 933 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 CYBBP04839 570 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 PAQR3Q6TCH7 311 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 CABP7Q86V35 215 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 IRF2BP1Q8IU81 584 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 Q8N1Y9 231 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 FBXO15Q8NCQ5 510 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 GSTCDQ8NEC7 633 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 ZFYVE21Q9BQ24 234 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 MRPL4Q9BYD3 311 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 EPB41L4BQ9H329 900 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 TRIM39Q9HCM9 518 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 DCP1AQ9NPI6 582 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 X6R8D5 127 aa6.6□□□□□ -1.35
PRPF4B-207ENST00000490399 H7BY64 318 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 SOD2P04179 222 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 KRT1P04264 644 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 C1QTNF9P0C862 333 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 SRGAP2CP0DJJ0 459 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 COL6A2P12110 1019 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 GRK2P25098 689 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 VIPR1P32241 457 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 GRK3P35626 688 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 PRR5P85299 388 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 PABPC4Q13310 644 aaKnown RBP eCLIP6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 KIZQ2M2Z5 673 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 PLEKHN1Q494U1 663 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 TRIM61Q5EBN2 209 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 MAGEB10Q96LZ2 347 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 ALG1Q9BT22 464 aa6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 ZNF552Q9H707 407 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 DBR1Q9UK59 544 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 COA3Q9Y2R0 106 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-207ENST00000490399 MYOCOSA0A1B0GUC4 107 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 ENPP3O14638 875 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 SRGAP3O43295 1099 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 SDSP20132 328 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 YBX1P67809 324 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 PAK1Q13153 545 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 TCEA2Q15560 299 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 MROH9Q5TGP6 573 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 TMC6Q7Z403 805 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 PCDH19Q8TAB3 1148 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 SGPP1Q9BX95 441 aa6.58□□□□□ -1.36
PRPF4B-207ENST00000490399 KCNQ2O43526 872 aa6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 EFCAB14O75071 495 aa6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 DNAJC8O75937 253 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 CFPP27918 469 aa6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 SRSF3P84103 164 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 NR1I3Q14994 352 aa6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 FNDC3BQ53EP0 1204 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 ZC3H7AQ8IWR0 971 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 RBM12BQ8IXT5 1001 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 DHX37Q8IY37 1157 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 NETO2Q8NC67 525 aa6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 PIP4K2CQ8TBX8 421 aa6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 TOX2Q96NM4 488 aa6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 MCOLN1Q9GZU1 580 aa6.57□□□□□ -1.36
PRPF4B-207ENST00000490399 LOC105371045A0A1W2PR82 267 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 TCRBV16S1A1N1A0A5B0 115 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 FAM47E-STBD1D6RA91 191 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 ARVCFO00192 962 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 NFIBO00712 420 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 IRS4O14654 1257 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 SGSM2O43147 1006 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 DGKIO75912 1065 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 PYGMP11217 842 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 MAPKAPK2P49137 400 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 NCKAP1LP55160 1127 aa6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 ZNF200P98182 395 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-207ENST00000490399 ZNF460Q14592 562 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms