RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 GOLGA1Q92805 767 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 PGBD1Q96JS3 809 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 TMX2Q9Y320 296 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 PHLPP2Q6ZVD8 1323 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 hCG_1984214I3L0E3 225 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 NRDCO43847 1150 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 RPS6KA3P51812 740 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 KRT85P78386 507 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 ARMCX6Q7L4S7 300 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 ZNF713Q8N859 430 aaPredicted RBP10.94□□□□□ -0.66
NOD1-208ENST00000489614 KLHL23Q8NBE8 558 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
NOD1-208ENST00000489614 NUP133Q8WUM0 1156 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 TACO1Q9BSH4 297 aaKnown RBP10.94□□□□□ -0.66
NOD1-208ENST00000489614 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.94□□□□□ -0.66
NOD1-208ENST00000489614 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 TMOD2Q9NZR1 351 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 EPS15P42566 896 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 TRAF1Q13077 416 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 USP4Q13107 963 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 AOPEPQ8N6M6 819 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 BCAS4Q8TDM0 211 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 A1CFQ9NQ94 594 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 MYO1BO43795 1136 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 SNUPNO95149 360 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 GBP2P32456 591 aaPredicted RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 TNFAIP1Q13829 316 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 CASP8Q14790 479 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 TBC1D25Q3MII6 688 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 EARS2Q5JPH6 523 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 USP17L2Q6R6M4 530 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 TRIM22Q8IYM9 498 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 GDAP1L1Q96MZ0 367 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 PNKPQ96T60 521 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 ADARB2Q9NS39 739 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 V9GY48 417 aaPredicted RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 KLRF2D3W0D1 207 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 EDIL3O43854 480 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 PPFIA3O75145 1194 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 PARP1P09874 1014 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 TNNI2P48788 182 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 CEBPZQ03701 1054 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 KCNB1Q14721 858 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 BRD3Q15059 726 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 TBC1D10BQ4KMP7 808 aaPredicted RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 THEMIS2Q5TEJ8 643 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 C9orf131Q5VYM1 1079 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 RSRC2Q7L4I2 434 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 LRRC47Q8N1G4 583 aaKnown RBP10.93□□□□□ -0.66
NOD1-208ENST00000489614 LINC00301Q8NCQ3 95 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 FAM71BQ8TC56 605 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 OXER1Q8TDS5 423 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 DHX58Q96C10 678 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 SPATA32Q96LK8 384 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 SCLT1Q96NL6 688 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 ZMYND12Q9H0C1 365 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 CLSTN2Q9H4D0 955 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 JMJD4Q9H9V9 463 aa10.93□□□□□ -0.66
NOD1-208ENST00000489614 YEATS4O95619 227 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 GH2P01242 217 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 CEP85LQ5SZL2 805 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 GPATCH4Q5T3I0 446 aaKnown RBP10.92□□□□□ -0.66
NOD1-208ENST00000489614 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 SARM1Q6SZW1 724 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 NOSTRINQ8IVI9 506 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 C3orf20Q8ND61 904 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.92□□□□□ -0.66
NOD1-208ENST00000489614 IFNKQ9P0W0 207 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 L1RE1Q9UN81 338 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 GDF11O95390 407 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 RBM26Q5T8P6 1007 aaKnown RBP10.92□□□□□ -0.66
NOD1-208ENST00000489614 RBM43Q6ZSC3 357 aaKnown RBP10.92□□□□□ -0.66
NOD1-208ENST00000489614 XPO4Q9C0E2 1151 aaKnown RBP10.92□□□□□ -0.66
NOD1-208ENST00000489614 SCAND2PQ9GZW5 306 aaPredicted RBP10.92□□□□□ -0.66
NOD1-208ENST00000489614 DEFB129Q9H1M3 183 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 DDX19AQ9NUU7 478 aaKnown RBP10.92□□□□□ -0.66
NOD1-208ENST00000489614 DDX20Q9UHI6 824 aaKnown RBP10.92□□□□□ -0.66
NOD1-208ENST00000489614 STX8Q9UNK0 236 aa10.92□□□□□ -0.66
NOD1-208ENST00000489614 H3BQV1 296 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 DDNO94850 711 aaPredicted RBP10.91□□□□□ -0.66
NOD1-208ENST00000489614 GUCY1B3Q02153 619 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 IFFO2Q5TF58 517 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 GALNT17Q6IS24 598 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 FTOQ9C0B1 505 aaKnown RBP eCLIP10.91□□□□□ -0.66
NOD1-208ENST00000489614 RNF181Q9P0P0 153 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 KCNJ14Q9UNX9 436 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 MRFAP1Q9Y605 127 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 LRRIQ3A6PVS8 624 aaPredicted RBP10.91□□□□□ -0.66
NOD1-208ENST00000489614 WNT7AO00755 349 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 ICA1Q05084 483 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 NAT10Q9H0A0 1025 aaKnown RBP10.91□□□□□ -0.66
NOD1-208ENST00000489614 KCND1Q9NSA2 647 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 VPS54Q9P1Q0 977 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 CLIC4Q9Y696 253 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 GJA3Q9Y6H8 435 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms