RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 BEX3Q00994 111 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 C7orf61Q8IZ16 206 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 OR6J1Q8NGC5 347 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 CCDC12Q8WUD4 166 aaPredicted RBP19.93■□□□□ 0.78
MDC1-206ENST00000489540 PHKBQ93100 1093 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 STARD7Q9NQZ5 370 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 LCTP09848 1927 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 SMCO2A6NFE2 343 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 SPDYE3A6NKU9 549 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 TGFB3P10600 412 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 CPT1AP50416 773 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 ADCY7P51828 1080 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 NEK4P51957 841 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 AK2P54819 239 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 SNX17Q15036 470 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 PKN1Q16512 942 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 TYW1BQ6NUM6 668 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 TRIM22Q8IYM9 498 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 IL31RAQ8NI17 732 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 SLC26A6Q9BXS9 759 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 SLKQ9H2G2 1235 aaPredicted RBP19.92■□□□□ 0.78
MDC1-206ENST00000489540 DDX41Q9UJV9 622 aaKnown RBP19.92■□□□□ 0.78
MDC1-206ENST00000489540 MRVI1Q9Y6F6 885 aa19.92■□□□□ 0.78
MDC1-206ENST00000489540 MCM3APO60318 1980 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 ARIH2O95376 493 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 PTGS1P23219 599 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 RTP1P59025 263 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 SSRP1Q08945 709 aaKnown RBP19.91■□□□□ 0.78
MDC1-206ENST00000489540 STK3Q13188 491 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 UBE2SQ16763 222 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 LY6KQ17RY6 165 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 GNPTABQ3T906 1256 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 PCNX4Q63HM2 1172 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 VTI1AQ96AJ9 217 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 EHMT1Q9H9B1 1298 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 TPCN1Q9ULQ1 816 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 PCDHA6Q9UN73 950 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 PCDHA8Q9Y5H6 950 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 MYH6P13533 1939 aa19.91■□□□□ 0.78
MDC1-206ENST00000489540 KPNA6O60684 536 aa19.9■□□□□ 0.78
MDC1-206ENST00000489540 RGS20O76081 388 aa19.9■□□□□ 0.78
MDC1-206ENST00000489540 FOSP01100 380 aaPredicted RBP19.9■□□□□ 0.78
MDC1-206ENST00000489540 GH1P01241 217 aa19.9■□□□□ 0.78
MDC1-206ENST00000489540 COPS5Q92905 334 aa19.9■□□□□ 0.78
MDC1-206ENST00000489540 C22orf23Q9BZE7 217 aa19.9■□□□□ 0.78
MDC1-206ENST00000489540 POLR3EQ9NVU0 708 aa19.9■□□□□ 0.78
MDC1-206ENST00000489540 ATP11BQ9Y2G3 1177 aa19.9■□□□□ 0.78
MDC1-206ENST00000489540 ESYT2A0FGR8 921 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 A6NJR5 290 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 PFKFB2O60825 505 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 CDKL5O76039 1030 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 MRPS9P82933 396 aaKnown RBP19.89■□□□□ 0.77
MDC1-206ENST00000489540 LAMC2Q13753 1193 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 TRIM60Q495X7 471 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 CXCL17Q6UXB2 119 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 INPP4AQ96PE3 977 aaPredicted RBP19.89■□□□□ 0.77
MDC1-206ENST00000489540 SEZ6LQ9BYH1 1024 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 UPF2Q9HAU5 1272 aaKnown RBP19.89■□□□□ 0.77
MDC1-206ENST00000489540 C6orf50Q9HD87 102 aa19.89■□□□□ 0.77
MDC1-206ENST00000489540 FRMPD3Q5JV73 1810 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 A0A0U1RQG5 324 aaPredicted RBP19.88■□□□□ 0.77
MDC1-206ENST00000489540 GNA11P29992 359 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 ICAM3P32942 547 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 SCRN1Q12765 414 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 MCTP2Q6DN12 878 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 NLRX1Q86UT6 975 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 EMID1Q96A84 441 aaPredicted RBP19.88■□□□□ 0.77
MDC1-206ENST00000489540 ZMYND12Q9H0C1 365 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 SH3GLB2Q9NR46 395 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 RTEL1Q9NZ71 1219 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 GTF3C3Q9Y5Q9 886 aa19.88■□□□□ 0.77
MDC1-206ENST00000489540 PPFIA3O75145 1194 aa19.87■□□□□ 0.77
MDC1-206ENST00000489540 DEXIO95424 95 aa19.87■□□□□ 0.77
MDC1-206ENST00000489540 RBM25P49756 843 aaKnown RBP19.87■□□□□ 0.77
MDC1-206ENST00000489540 AP3B2Q13367 1082 aa19.87■□□□□ 0.77
MDC1-206ENST00000489540 DHX37Q8IY37 1157 aaKnown RBP19.87■□□□□ 0.77
MDC1-206ENST00000489540 CCDC148Q8NFR7 591 aa19.87■□□□□ 0.77
MDC1-206ENST00000489540 ZFP91Q96JP5 570 aaPredicted RBP19.87■□□□□ 0.77
MDC1-206ENST00000489540 TOX2Q96NM4 488 aa19.87■□□□□ 0.77
MDC1-206ENST00000489540 PRKAG2Q9UGJ0 569 aa19.87■□□□□ 0.77
MDC1-206ENST00000489540 TNRC18O15417 2968 aaPredicted RBP19.87■□□□□ 0.77
MDC1-206ENST00000489540 SPATA31C2B4DYI2 1134 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 ARVCFO00192 962 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 FIBPO43427 364 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 CLK2P49760 499 aaKnown RBP19.86■□□□□ 0.77
MDC1-206ENST00000489540 CDK7P50613 346 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 TLE2Q04725 743 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 ARHGAP1Q07960 439 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 ANKRD33Q7Z3H0 272 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 BICD2Q8TD16 824 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 AFG1LQ8WV93 481 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 ZMYND8Q9ULU4 1186 aaPredicted RBP19.86■□□□□ 0.77
MDC1-206ENST00000489540 MROH7Q68CQ1 1323 aa19.86■□□□□ 0.77
MDC1-206ENST00000489540 DCDC2CA8MYV0 355 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 MYL3P08590 195 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 PURAQ00577 322 aaKnown RBP19.85■□□□□ 0.77
MDC1-206ENST00000489540 CELF3Q5SZQ8 465 aaKnown RBP19.85■□□□□ 0.77
MDC1-206ENST00000489540 FAM177A1Q8N128 213 aaPredicted RBP19.85■□□□□ 0.77
MDC1-206ENST00000489540 CDHR1Q96JP9 859 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 MTG1Q9BT17 334 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms