RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 JAMLQ86YT9 394 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 TMEFF1Q8IYR6 380 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 ZBTB38Q8NAP3 1195 aaPredicted RBP6.09□□□□□ -1.43
XRN1-213ENST00000489241 ZSWIM2Q8NEG5 633 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 BTN2A2Q8WVV5 523 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 CDC6Q99741 560 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 NKX2-4Q9H2Z4 354 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 PCDHA5Q9Y5H7 936 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 CD2APQ9Y5K6 639 aa6.09□□□□□ -1.43
XRN1-213ENST00000489241 TRBV23OR9-2A0A075B6M9 112 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 SRGAP3O43295 1099 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 TBC1D8O95759 1140 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 SNRPB2P08579 225 aaKnown RBP6.08□□□□□ -1.44
XRN1-213ENST00000489241 KCNJ6P48051 423 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 MAPKAPK2P49137 400 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 DALRD3Q5D0E6 543 aaKnown RBP6.08□□□□□ -1.44
XRN1-213ENST00000489241 ZC3H14Q6PJT7 736 aaKnown RBP6.08□□□□□ -1.44
XRN1-213ENST00000489241 SYNPOQ8N3V7 929 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 RELTQ969Z4 430 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 LGR4Q9BXB1 951 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 KRTAP4-2Q9BYR5 136 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 RTEL1Q9NZ71 1219 aa6.08□□□□□ -1.44
XRN1-213ENST00000489241 CCDC163A0A0D9SF12 145 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 STXBP3O00186 592 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 SASH1O94885 1247 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 MSL3P1P0C860 447 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 FGFR1P11362 822 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 IFNGR1P15260 489 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 BUD31P41223 144 aaPredicted RBP6.07□□□□□ -1.44
XRN1-213ENST00000489241 CORO7P57737 925 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 SCRN1Q12765 414 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 TAF7LQ5H9L4 462 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 RCSD1Q6JBY9 416 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 SCUBE1Q8IWY4 988 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 SP8Q8IXZ3 490 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 RPUSD2Q8IZ73 545 aaKnown RBP6.07□□□□□ -1.44
XRN1-213ENST00000489241 KCTD13Q8WZ19 329 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 MCMBPQ9BTE3 642 aa6.07□□□□□ -1.44
XRN1-213ENST00000489241 PRODHO43272 600 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 TBX1O43435 398 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 BUB1BO60566 1050 aaPredicted RBP6.06□□□□□ -1.44
XRN1-213ENST00000489241 CYBBP04839 570 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 DBHP09172 617 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 VIL1P09327 827 aaKnown RBP6.06□□□□□ -1.44
XRN1-213ENST00000489241 PAMP19021 973 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 ECI1P42126 302 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 RBM10P98175 930 aaKnown RBP6.06□□□□□ -1.44
XRN1-213ENST00000489241 MAP4K2Q12851 820 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 NFIXQ14938 502 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 FOXB2Q5VYV0 432 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 IQCEQ6IPM2 695 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 PAQR3Q6TCH7 311 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 NSMFQ6X4W1 530 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 COPS5Q92905 334 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 PTCHD1Q96NR3 888 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 PDLIM7Q9NR12 457 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 ARHGEF4Q9NR80 690 aa6.06□□□□□ -1.44
XRN1-213ENST00000489241 TRBV23-1A0A0A0MS06 115 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 CAPNS1P04632 268 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 SCG5P05408 212 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 PFKLP17858 780 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 NCKAP1LP55160 1127 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 GFRA1P56159 465 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 ZNF200P98182 395 aaPredicted RBP6.05□□□□□ -1.44
XRN1-213ENST00000489241 BICRALQ6AI39 1079 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 DHRS4Q9BTZ2 278 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 XYLT2Q9H1B5 865 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 PLAAQ9Y263 795 aa6.05□□□□□ -1.44
XRN1-213ENST00000489241 IRS2Q9Y4H2 1338 aa6.04□□□□□ -1.44
XRN1-213ENST00000489241 PABPC1P11940 636 aaKnown RBP6.04□□□□□ -1.44
XRN1-213ENST00000489241 IGFBP6P24592 240 aaPredicted RBP6.04□□□□□ -1.44
XRN1-213ENST00000489241 L1CAMP32004 1257 aa6.04□□□□□ -1.44
XRN1-213ENST00000489241 GRIA2P42262 883 aa6.04□□□□□ -1.44
XRN1-213ENST00000489241 CAP1Q01518 475 aa6.04□□□□□ -1.44
XRN1-213ENST00000489241 E4F1Q66K89 784 aaPredicted RBP6.04□□□□□ -1.44
XRN1-213ENST00000489241 LINC01356Q8N9X3 169 aa6.04□□□□□ -1.44
XRN1-213ENST00000489241 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
XRN1-213ENST00000489241 EXOC2Q96KP1 924 aa6.04□□□□□ -1.44
XRN1-213ENST00000489241 PWWP2AQ96N64 755 aa6.04□□□□□ -1.44
XRN1-213ENST00000489241 LUC7LQ9NQ29 371 aaKnown RBP6.04□□□□□ -1.44
XRN1-213ENST00000489241 GPRC5CQ9NQ84 441 aa6.04□□□□□ -1.44
XRN1-213ENST00000489241 NPHP3-ACAD11A0A0J9YXS1 232 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 DLX3O60479 287 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 FOXD2O60548 495 aaPredicted RBP6.03□□□□□ -1.44
XRN1-213ENST00000489241 THBDP07204 575 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 PLS3P13797 630 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 SYN1P17600 705 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 FBLN1P23142 703 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 SUMO1P63165 101 aaKnown RBP6.03□□□□□ -1.44
XRN1-213ENST00000489241 TARBP2Q15633 366 aaKnown RBP6.03□□□□□ -1.44
XRN1-213ENST00000489241 VMACQ2NL98 169 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 TM4SF20Q53R12 229 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 FAM209AQ5JX71 171 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 ACBD5Q5T8D3 534 aaPredicted RBP6.03□□□□□ -1.44
XRN1-213ENST00000489241 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 YOD1Q5VVQ6 348 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms