RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 B4DLN1 442 aa19.05■□□□□ 0.64
USP48-210ENST00000489108 H3BQ06 376 aaPredicted RBP19.05■□□□□ 0.64
USP48-210ENST00000489108 EFCAB14O75071 495 aa19.05■□□□□ 0.64
USP48-210ENST00000489108 GH1P01241 217 aa19.05■□□□□ 0.64
USP48-210ENST00000489108 CASTP20810 708 aaKnown RBP19.05■□□□□ 0.64
USP48-210ENST00000489108 MRPL12P52815 198 aaKnown RBP19.05■□□□□ 0.64
USP48-210ENST00000489108 ARHGAP1Q07960 439 aa19.05■□□□□ 0.64
USP48-210ENST00000489108 PUS10Q3MIT2 529 aaKnown RBP19.05■□□□□ 0.64
USP48-210ENST00000489108 POTEBQ6S5H4 581 aa19.05■□□□□ 0.64
USP48-210ENST00000489108 SEPT14Q6ZU15 432 aa19.05■□□□□ 0.64
USP48-210ENST00000489108 INSL6Q9Y581 213 aa19.05■□□□□ 0.64
USP48-210ENST00000489108 DCXO43602 365 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 TOP1P11387 765 aaKnown RBP19.04■□□□□ 0.64
USP48-210ENST00000489108 ZNF618Q5T7W0 954 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 TRAF7Q6Q0C0 670 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 C7orf31Q8N865 590 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 WNT8BQ93098 351 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 MRPL38Q96DV4 380 aaKnown RBP19.04■□□□□ 0.64
USP48-210ENST00000489108 ALG1Q9BT22 464 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 FSD1Q9BTV5 496 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 ANAPC4Q9UJX5 808 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 PNMA2Q9UL42 364 aa19.04■□□□□ 0.64
USP48-210ENST00000489108 WDFY4Q6ZS81 3184 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 ORC4O43929 436 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 PDHBP11177 359 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 PSEN2P49810 448 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 PTK7Q13308 1070 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 MBTPS1Q14703 1052 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 TRIM71Q2Q1W2 868 aaKnown RBP19.03■□□□□ 0.64
USP48-210ENST00000489108 TBC1D5Q92609 795 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 DCTPP1Q9H773 170 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 TOMM22Q9NS69 142 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 CTNNA3Q9UI47 895 aa19.03■□□□□ 0.64
USP48-210ENST00000489108 LGR5O75473 907 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 FGRP09769 529 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 ZNF200P98182 395 aaPredicted RBP19.02■□□□□ 0.64
USP48-210ENST00000489108 DGKDQ16760 1214 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 USH1GQ495M9 461 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 RRP12Q5JTH9 1297 aaKnown RBP19.02■□□□□ 0.64
USP48-210ENST00000489108 VPS53Q5VIR6 699 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 EP400NLQ6ZTU2 488 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 RGS22Q8NE09 1264 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 TAAR1Q96RJ0 339 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 KCNH6Q9H252 994 aa19.02■□□□□ 0.64
USP48-210ENST00000489108 WDR19Q8NEZ3 1342 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 HTRA4P83105 476 aaPredicted RBP19.01■□□□□ 0.63
USP48-210ENST00000489108 ZNF543Q08ER8 600 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 PTPROQ16827 1216 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 EPC2Q52LR7 807 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 MYOCDQ8IZQ8 938 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 BANK1Q8NDB2 785 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 DBF4BQ8NFT6 615 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 ANKS1AQ92625 1134 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 MYH7BA7E2Y1 1941 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 KIAA1217Q5T5P2 1943 aa19.01■□□□□ 0.63
USP48-210ENST00000489108 MICAL3Q7RTP6 2002 aa19■□□□□ 0.63
USP48-210ENST00000489108 AMHP03971 560 aa19■□□□□ 0.63
USP48-210ENST00000489108 ZP2Q05996 745 aa19■□□□□ 0.63
USP48-210ENST00000489108 MFSD10Q14728 455 aa19■□□□□ 0.63
USP48-210ENST00000489108 KIAA0753Q2KHM9 967 aa19■□□□□ 0.63
USP48-210ENST00000489108 TCEAL5Q5H9L2 206 aa19■□□□□ 0.63
USP48-210ENST00000489108 PI4K2BQ8TCG2 481 aa19■□□□□ 0.63
USP48-210ENST00000489108 SP7Q8TDD2 431 aaPredicted RBP19■□□□□ 0.63
USP48-210ENST00000489108 PABPC5Q96DU9 382 aaKnown RBP19■□□□□ 0.63
USP48-210ENST00000489108 TCP11L1Q9NUJ3 509 aa19■□□□□ 0.63
USP48-210ENST00000489108 DDX41Q9UJV9 622 aaKnown RBP19■□□□□ 0.63
USP48-210ENST00000489108 C19orf67A6NJJ6 358 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 H3BNC9 293 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 HAS3O00219 553 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 MKRN4PQ13434 485 aaPredicted RBP18.99■□□□□ 0.63
USP48-210ENST00000489108 GPM6BQ13491 265 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 HIC1Q14526 733 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 STXBP2Q15833 593 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 TIGD5Q53EQ6 642 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 C20orf194Q5TEA3 1177 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 HFE2Q6ZVN8 426 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 SYTL5Q8TDW5 730 aaPredicted RBP18.99■□□□□ 0.63
USP48-210ENST00000489108 NSUN6Q8TEA1 469 aaKnown RBP18.99■□□□□ 0.63
USP48-210ENST00000489108 CPVLQ9H3G5 476 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 COL20A1Q9P218 1284 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 TTC41PQ6P2S7 1318 aa18.99■□□□□ 0.63
USP48-210ENST00000489108 MYO7AQ13402 2215 aa18.98■□□□□ 0.63
USP48-210ENST00000489108 ZNF286BP0CG31 522 aa18.98■□□□□ 0.63
USP48-210ENST00000489108 OTUD7AQ8TE49 926 aaPredicted RBP18.98■□□□□ 0.63
USP48-210ENST00000489108 SAMD11Q96NU1 681 aa18.98■□□□□ 0.63
USP48-210ENST00000489108 KATNAL1Q9BW62 490 aa18.98■□□□□ 0.63
USP48-210ENST00000489108 UBA5Q9GZZ9 404 aa18.98■□□□□ 0.63
USP48-210ENST00000489108 PRKAG3Q9UGI9 489 aa18.98■□□□□ 0.63
USP48-210ENST00000489108 FAM50BQ9Y247 325 aa18.98■□□□□ 0.63
USP48-210ENST00000489108 F2P00734 622 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 GOLGA8HP0CJ92 632 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 SNHG28P0DPA3 235 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 LAMC2Q13753 1193 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 ALX1Q15699 326 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 ADHFE1Q8IWW8 467 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 DHX37Q8IY37 1157 aaKnown RBP18.97■□□□□ 0.63
USP48-210ENST00000489108 TMEM192Q8IY95 271 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 IWS1Q96ST2 819 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 RMDN3Q96TC7 470 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 CLDND1Q9NY35 253 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms