RNA–Protein interactions for RNA: ENST00000488998.1

CCDC146-209, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-209ENST00000488998 CABP7Q86V35 215 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 IGDCC3Q8IVU1 814 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 TEX2Q8IWB9 1127 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 KREMEN2Q8NCW0 462 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 SIGLEC10Q96LC7 697 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 MMP19Q99542 508 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 MARCH2Q9P0N8 246 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 SIT1Q9Y3P8 196 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 PCDHA5Q9Y5H7 936 aa4.79□□□□□ -1.64
CCDC146-209ENST00000488998 BUB1BO60566 1050 aaPredicted RBP4.78□□□□□ -1.64
CCDC146-209ENST00000488998 NTRK1P04629 796 aa4.78□□□□□ -1.64
CCDC146-209ENST00000488998 GTF2F1P35269 517 aaKnown RBP eCLIP4.78□□□□□ -1.64
CCDC146-209ENST00000488998 CKAP2LQ8IYA6 745 aa4.78□□□□□ -1.64
CCDC146-209ENST00000488998 TMEM145Q8NBT3 493 aa4.78□□□□□ -1.64
CCDC146-209ENST00000488998 PLEKHO2Q8TD55 490 aa4.78□□□□□ -1.64
CCDC146-209ENST00000488998 EPN3Q9H201 632 aa4.78□□□□□ -1.64
CCDC146-209ENST00000488998 EPB41L4AQ9HCS5 686 aaPredicted RBP4.78□□□□□ -1.64
CCDC146-209ENST00000488998 EIF4G3O43432 1585 aaKnown RBP4.78□□□□□ -1.64
CCDC146-209ENST00000488998 KIAA0586Q9BVV6 1533 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 MAGI1Q96QZ7 1491 aaPredicted RBP4.77□□□□□ -1.65
CCDC146-209ENST00000488998 C22orf46C9J442 243 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 MEFVO15553 781 aaPredicted RBP4.77□□□□□ -1.65
CCDC146-209ENST00000488998 LCP1P13796 627 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 BCL6P41182 706 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 LIMS1P48059 325 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 GFRA1P56159 465 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 VMACQ2NL98 169 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 ZNF385BQ569K4 471 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 SPOCD1Q6ZMY3 1216 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 CEP68Q76N32 757 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 PPIL6Q8IXY8 311 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 TMEFF1Q8IYR6 380 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 DIO2Q92813 273 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 IER2Q9BTL4 223 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCDC146-209ENST00000488998 PCDHA2Q9Y5H9 948 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 TIMM13Q9Y5L4 95 aaPredicted RBP4.77□□□□□ -1.65
CCDC146-209ENST00000488998 ARHGEF11O15085 1522 aa4.77□□□□□ -1.65
CCDC146-209ENST00000488998 ERCC6Q03468 1493 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 GRIN2AQ12879 1464 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 CCDC18Q5T9S5 1454 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 RFXAPO00287 272 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 IRS4O14654 1257 aaPredicted RBP4.76□□□□□ -1.65
CCDC146-209ENST00000488998 U2SURPO15042 1029 aaKnown RBP4.76□□□□□ -1.65
CCDC146-209ENST00000488998 PRODHO43272 600 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 CPP00450 1065 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 CAPNS1P04632 268 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 SCG5P05408 212 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 ATF2P15336 505 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 FPR2P25090 351 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 MC3RP41968 323 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 RPL11P62913 178 aaKnown RBP4.76□□□□□ -1.65
CCDC146-209ENST00000488998 WWC2Q6AWC2 1192 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 IQCEQ6IPM2 695 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 CNKSR3Q6P9H4 555 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 FGD6Q6ZV73 1430 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 SUPT6HQ7KZ85 1726 aaKnown RBP4.76□□□□□ -1.65
CCDC146-209ENST00000488998 RCBTB1Q8NDN9 531 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 ALG3Q92685 438 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 CHAMP1Q96JM3 812 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 PWWP2AQ96N64 755 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 SETD5Q9C0A6 1442 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 FBXL7Q9UJT9 491 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 EHBP1L1Q8N3D4 1523 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 MTUS2Q5JR59 1369 aa4.76□□□□□ -1.65
CCDC146-209ENST00000488998 HECW1Q76N89 1606 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 IRS2Q9Y4H2 1338 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 BLACEA4D250 179 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 DLX3O60479 287 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 ASGR2P07307 311 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 PFKLP17858 780 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 PMLP29590 882 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 HSP90AA2PQ14568 343 aaPredicted RBP4.75□□□□□ -1.65
CCDC146-209ENST00000488998 TARBP2Q15633 366 aaKnown RBP4.75□□□□□ -1.65
CCDC146-209ENST00000488998 SLC35F1Q5T1Q4 408 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 YOD1Q5VVQ6 348 aaPredicted RBP4.75□□□□□ -1.65
CCDC146-209ENST00000488998 E4F1Q66K89 784 aaPredicted RBP4.75□□□□□ -1.65
CCDC146-209ENST00000488998 SPATC1Q76KD6 591 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 AMIGO3Q86WK7 504 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 FAM129CQ86XR2 697 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 TRMT2BQ96GJ1 504 aaKnown RBP4.75□□□□□ -1.65
CCDC146-209ENST00000488998 C1orf159Q96HA4 380 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 PEX11GQ96HA9 241 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 C8orf37Q96NL8 207 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 ARHGEF4Q9NR80 690 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 PFDN2Q9UHV9 154 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 NUDT5Q9UKK9 219 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 ADAMTS20P59510 1910 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 DISP1Q96F81 1524 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 RAB3GAP2Q9H2M9 1393 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 KIAA0556O60303 1618 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 SYNJ2O15056 1496 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 NCOA2Q15596 1464 aa4.75□□□□□ -1.65
CCDC146-209ENST00000488998 MYOM3Q5VTT5 1437 aa4.74□□□□□ -1.65
CCDC146-209ENST00000488998 EPRSP07814 1512 aaKnown RBP4.74□□□□□ -1.65
CCDC146-209ENST00000488998 MAGI3Q5TCQ9 1506 aa4.74□□□□□ -1.65
CCDC146-209ENST00000488998 IQCA1LA6NCM1 817 aa4.74□□□□□ -1.65
CCDC146-209ENST00000488998 MYO1BO43795 1136 aa4.74□□□□□ -1.65
CCDC146-209ENST00000488998 BMP7P18075 431 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms