RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TMEM266Q2M3C6 531 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 TKFCQ3LXA3 575 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 BRI3BPQ8WY22 251 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
COL21A1-211ENST00000488912 TAAR1Q96RJ0 339 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 SPATC1LQ9H0A9 340 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 TSPY26PQ9H489 355 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 TXNRD2Q9NNW7 524 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
COL21A1-211ENST00000488912 FRMPD4Q14CM0 1322 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 TXLNAP40222 546 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 UBA7P41226 1012 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 KARSQ15046 597 aaKnown RBP12.33□□□□□ -0.44
COL21A1-211ENST00000488912 RIOX2Q8IUF8 465 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
COL21A1-211ENST00000488912 BTBD19C9JJ37 291 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 KIF3CO14782 793 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 FOXN1O15353 648 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 MARCH6O60337 910 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 CYP2C8P10632 490 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 EIF2AK2P19525 551 aaKnown RBP12.32□□□□□ -0.44
COL21A1-211ENST00000488912 MRE11P49959 708 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 E2F4Q16254 413 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 CEP55Q53EZ4 464 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 CYP39A1Q9NYL5 469 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 PDHXO00330 501 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 MSH4O15457 936 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 CCDC192P0DO97 292 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 TYRO3Q06418 890 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 PNOCQ13519 176 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 SLFN12Q8IYM2 578 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 GRAMD1CQ8IYS0 662 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 CHST13Q8NET6 341 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 RMDN3Q96TC7 470 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 MMTAG2Q9BU76 263 aaKnown RBP12.32□□□□□ -0.44
COL21A1-211ENST00000488912 MOV10L1Q9BXT6 1211 aaKnown RBP12.32□□□□□ -0.44
COL21A1-211ENST00000488912 PXMP2Q9NR77 195 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 DISC1Q9NRI5 854 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 LRWD1Q9UFC0 647 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 PNMA3Q9UL41 463 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 PCDHA12Q9UN75 941 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 RABGAP1Q9Y3P9 1069 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 KIAA1217Q5T5P2 1943 aa12.32□□□□□ -0.44
COL21A1-211ENST00000488912 TBX3O15119 743 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 PDIA5Q14554 519 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 PGM5Q15124 567 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 ZRSR1Q15695 479 aaKnown RBP12.31□□□□□ -0.44
COL21A1-211ENST00000488912 PCNX4Q63HM2 1172 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 SAPCD2Q86UD0 394 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 CABP7Q86V35 215 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 NCAPG2Q86XI2 1143 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 RAB34Q9BZG1 259 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 R3HDMLQ9H3Y0 253 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 A0A087WWV3 80 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 ITGB5P18084 799 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 ZNF157P51786 506 aaPredicted RBP12.31□□□□□ -0.44
COL21A1-211ENST00000488912 MRPS9P82933 396 aaKnown RBP12.31□□□□□ -0.44
COL21A1-211ENST00000488912 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
COL21A1-211ENST00000488912 PDXDC2PQ6P474 469 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 SASS6Q6UVJ0 657 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 PLA2G4DQ86XP0 818 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 RASAL3Q86YV0 1011 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 CEP57L1Q8IYX8 460 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 IQUBQ8NA54 791 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 SMCR8Q8TEV9 937 aaPredicted RBP12.31□□□□□ -0.44
COL21A1-211ENST00000488912 PLIN2Q99541 437 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 PDCD2LQ9BRP1 358 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 SLC45A1Q9Y2W3 748 aa12.31□□□□□ -0.44
COL21A1-211ENST00000488912 ZNFX1Q9P2E3 1918 aaKnown RBP12.3□□□□□ -0.44
COL21A1-211ENST00000488912 MEIS1O00470 390 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 ERCC3P19447 782 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 STAT6P42226 847 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 SPIRE1Q08AE8 756 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 POSTNQ15063 836 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 Q3C1V9 767 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 NAALADL2Q58DX5 795 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 ARHGEF16Q5VV41 709 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 ANKRD23Q86SG2 305 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 ELOA2Q8IYF1 753 aaPredicted RBP12.3□□□□□ -0.44
COL21A1-211ENST00000488912 ANKRD35Q8N283 1001 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 LRRC15Q8TF66 581 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 PTPN18Q99952 460 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 MXRA8Q9BRK3 442 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 PYM1Q9BRP8 204 aaKnown RBP12.3□□□□□ -0.44
COL21A1-211ENST00000488912 GRPEL1Q9HAV7 217 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 FBXO40Q9UH90 709 aa12.3□□□□□ -0.44
COL21A1-211ENST00000488912 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
COL21A1-211ENST00000488912 ARP10275 920 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
COL21A1-211ENST00000488912 PLCG1P19174 1290 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 AFMP43652 599 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms