RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 POLR3EQ9NVU0 708 aa25.8■■□□□ 1.72
VAMP2-204ENST00000488857 CCDC196A0A1B0GTZ2 297 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 hCG_1642624A0A1W2PR95 340 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 TRIM43BA6NCK2 446 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 DCDC2CA8MYV0 355 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 RGS20O76081 388 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 CCND2P30279 289 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 METAP2P50579 478 aaKnown RBP eCLIP25.79■■□□□ 1.72
VAMP2-204ENST00000488857 FAAP100Q0VG06 881 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 BRDTQ58F21 947 aaPredicted RBP25.79■■□□□ 1.72
VAMP2-204ENST00000488857 KCNV1Q6PIU1 500 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 TEX2Q8IWB9 1127 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 CUL5Q93034 780 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 TRIM43Q96BQ3 446 aaPredicted RBP25.79■■□□□ 1.72
VAMP2-204ENST00000488857 PSTPIP2Q9H939 334 aa25.79■■□□□ 1.72
VAMP2-204ENST00000488857 DDX41Q9UJV9 622 aaKnown RBP25.79■■□□□ 1.72
VAMP2-204ENST00000488857 SCN10AQ9Y5Y9 1956 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 KIAA0355O15063 1070 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 STAM2O75886 525 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 GH1P01241 217 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 MYCLP12524 364 aaPredicted RBP25.78■■□□□ 1.72
VAMP2-204ENST00000488857 PURAQ00577 322 aaKnown RBP25.78■■□□□ 1.72
VAMP2-204ENST00000488857 ARHGAP1Q07960 439 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 LY6KQ17RY6 165 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 USP17L6PQ6QN14 398 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 SH3RF1Q7Z6J0 888 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 SMARCC2Q8TAQ2 1214 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 EMID1Q96A84 441 aaPredicted RBP25.78■■□□□ 1.72
VAMP2-204ENST00000488857 LBHD1Q9BQE6 289 aaPredicted RBP25.78■■□□□ 1.72
VAMP2-204ENST00000488857 PRDM5Q9NQX1 630 aaPredicted RBP25.78■■□□□ 1.72
VAMP2-204ENST00000488857 CYP46A1Q9Y6A2 500 aa25.78■■□□□ 1.72
VAMP2-204ENST00000488857 hCG_1984214I3L0E3 225 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 KPNA6O60684 536 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 MDM2Q00987 491 aaPredicted RBP25.77■■□□□ 1.72
VAMP2-204ENST00000488857 ITGA7Q13683 1181 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 WWC2Q6AWC2 1192 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 PPP1R18Q6NYC8 613 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 HEATR3Q7Z4Q2 680 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 FAM126BQ8IXS8 530 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 ZNF713Q8N859 430 aaPredicted RBP25.77■■□□□ 1.72
VAMP2-204ENST00000488857 MRVI1Q9Y6F6 885 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 GRIN2DO15399 1336 aa25.77■■□□□ 1.72
VAMP2-204ENST00000488857 EIF5BO60841 1220 aaKnown RBP25.76■■□□□ 1.71
VAMP2-204ENST00000488857 TGFB3P10600 412 aa25.76■■□□□ 1.71
VAMP2-204ENST00000488857 ADD1P35611 737 aaKnown RBP25.76■■□□□ 1.71
VAMP2-204ENST00000488857 FXR1P51114 621 aaKnown RBP eCLIP25.76■■□□□ 1.71
VAMP2-204ENST00000488857 XRRA1Q6P2D8 792 aa25.76■■□□□ 1.71
VAMP2-204ENST00000488857 GPKOWQ92917 476 aaPredicted RBP eCLIP25.76■■□□□ 1.712e-6■■■□□ 15.9
VAMP2-204ENST00000488857 UBE2OQ9C0C9 1292 aaKnown RBP25.76■■□□□ 1.71
VAMP2-204ENST00000488857 PCDH10Q9P2E7 1040 aa25.76■■□□□ 1.71
VAMP2-204ENST00000488857 TBX21Q9UL17 535 aa25.76■■□□□ 1.71
VAMP2-204ENST00000488857 NAP1L2Q9ULW6 460 aaPredicted RBP25.76■■□□□ 1.71
VAMP2-204ENST00000488857 V9GY48 417 aaPredicted RBP25.76■■□□□ 1.71
VAMP2-204ENST00000488857 MRPS9P82933 396 aaKnown RBP25.75■■□□□ 1.71
VAMP2-204ENST00000488857 TOB2Q14106 344 aaPredicted RBP25.75■■□□□ 1.71
VAMP2-204ENST00000488857 MTG1Q9BT17 334 aaPredicted RBP25.75■■□□□ 1.71
VAMP2-204ENST00000488857 TMEM39AQ9NV64 488 aa25.75■■□□□ 1.71
VAMP2-204ENST00000488857 MYH7BA7E2Y1 1941 aa25.75■■□□□ 1.71
VAMP2-204ENST00000488857 CD4P01730 458 aa25.74■■□□□ 1.71
VAMP2-204ENST00000488857 ANAPC15P60006 121 aa25.74■■□□□ 1.71
VAMP2-204ENST00000488857 PCNX4Q63HM2 1172 aa25.74■■□□□ 1.71
VAMP2-204ENST00000488857 TDHQ8IZJ6 230 aa25.74■■□□□ 1.71
VAMP2-204ENST00000488857 INPP4AQ96PE3 977 aaPredicted RBP25.74■■□□□ 1.71
VAMP2-204ENST00000488857 BARHL2Q9NY43 387 aa25.74■■□□□ 1.71
VAMP2-204ENST00000488857 TLR3O15455 904 aaKnown RBP25.73■■□□□ 1.71
VAMP2-204ENST00000488857 MMP3P08254 477 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 MYL3P08590 195 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 ITGB8P26012 769 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 PDIA3P30101 505 aaKnown RBP25.73■■□□□ 1.71
VAMP2-204ENST00000488857 ICAM3P32942 547 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 LAMC2Q13753 1193 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 GNPTABQ3T906 1256 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 TYW1BQ6NUM6 668 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 AFG1LQ8WV93 481 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 IL17RAQ96F46 866 aa25.73■■□□□ 1.71
VAMP2-204ENST00000488857 STXBP3O00186 592 aa25.72■■□□□ 1.71
VAMP2-204ENST00000488857 PSMC6P62333 389 aa25.72■■□□□ 1.71
VAMP2-204ENST00000488857 PFKFB3Q16875 520 aaPredicted RBP25.72■■□□□ 1.71
VAMP2-204ENST00000488857 PPTC7Q8NI37 304 aa25.72■■□□□ 1.71
VAMP2-204ENST00000488857 BADQ92934 168 aa25.72■■□□□ 1.71
VAMP2-204ENST00000488857 UPF3BQ9BZI7 483 aaKnown RBP25.72■■□□□ 1.71
VAMP2-204ENST00000488857 RIC8AQ9NPQ8 531 aa25.72■■□□□ 1.71
VAMP2-204ENST00000488857 SZT2Q5T011 3432 aa25.72■■□□□ 1.71
VAMP2-204ENST00000488857 HOXD8P13378 290 aaPredicted RBP25.71■■□□□ 1.71
VAMP2-204ENST00000488857 RAG1P15918 1043 aa25.71■■□□□ 1.71
VAMP2-204ENST00000488857 NAPAP54920 295 aa25.71■■□□□ 1.71
VAMP2-204ENST00000488857 NTRK3Q16288 839 aa25.71■■□□□ 1.71
VAMP2-204ENST00000488857 CELF3Q5SZQ8 465 aaKnown RBP25.71■■□□□ 1.71
VAMP2-204ENST00000488857 MYSM1Q5VVJ2 828 aa25.71■■□□□ 1.71
VAMP2-204ENST00000488857 GLT8D2Q9H1C3 349 aa25.71■■□□□ 1.71
VAMP2-204ENST00000488857 PRPF3O43395 683 aaKnown RBP25.7■■□□□ 1.7
VAMP2-204ENST00000488857 TIMP1P01033 207 aa25.7■■□□□ 1.7
VAMP2-204ENST00000488857 UBA1P22314 1058 aaKnown RBP25.7■■□□□ 1.7
VAMP2-204ENST00000488857 SP2Q02086 613 aa25.7■■□□□ 1.7
VAMP2-204ENST00000488857 UBE2SQ16763 222 aa25.7■■□□□ 1.7
VAMP2-204ENST00000488857 NFRKBQ6P4R8 1299 aa25.7■■□□□ 1.7
VAMP2-204ENST00000488857 DHX37Q8IY37 1157 aaKnown RBP25.7■■□□□ 1.7
VAMP2-204ENST00000488857 ZNF274Q96GC6 653 aaPredicted RBP25.7■■□□□ 1.7
VAMP2-204ENST00000488857 SPDYE3A6NKU9 549 aa25.69■■□□□ 1.7
VAMP2-204ENST00000488857 SPATA31C2B4DYI2 1134 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms