RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 MAGEA1P43355 309 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 CFAP221Q4G0U5 840 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 RILPL1Q5EBL4 403 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 PPP1R12CQ9BZL4 782 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 DNAJC5Q9H3Z4 198 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 TAF1DQ9H5J8 278 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-229ENST00000488765 GOPCQ9HD26 462 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 SLC5A4Q9NY91 659 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 MAGEC2Q9UBF1 373 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-229ENST00000488765 UBOX5O94941 541 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 MTIF2P46199 727 aaKnown RBP17.8■□□□□ 0.44
MCF2L-229ENST00000488765 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-229ENST00000488765 ARFGAP2Q8N6H7 521 aa17.8■□□□□ 0.44
MCF2L-229ENST00000488765 HELBQ8NG08 1087 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-229ENST00000488765 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-229ENST00000488765 LRRC10BA6NIK2 292 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 TRIM75PA6NK02 468 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
MCF2L-229ENST00000488765 KRT16P08779 473 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 DRD4P21917 467 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 ICA1Q05084 483 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 LRRC14Q15048 493 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 TDRD12Q587J7 1177 aaKnown RBP17.79■□□□□ 0.44
MCF2L-229ENST00000488765 RNF220Q5VTB9 566 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 ADAT2Q7Z6V5 191 aaKnown RBP17.79■□□□□ 0.44
MCF2L-229ENST00000488765 MAGEC3Q8TD91 643 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 TUBGCP2Q9BSJ2 902 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 ARHGAP20Q9P2F6 1191 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-229ENST00000488765 SPDYE3A6NKU9 549 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 ECEL1O95672 775 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 MCM7P33993 719 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 SLCO1A2P46721 670 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 LRRC34Q8IZ02 419 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 CCDC155Q8N6L0 562 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 ALS2CR12Q96Q35 445 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 ZFATQ9P243 1243 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 RFX7Q2KHR2 1363 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 SNAP23O00161 211 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 SH2B2O14492 632 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-229ENST00000488765 KIF11P52732 1056 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 TRIM14Q14142 442 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 SMIM5Q71RC9 77 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 RRAGAQ7L523 313 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 SH2D4AQ9H788 454 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 PNMA3Q9UL41 463 aa17.79■□□□□ 0.44
MCF2L-229ENST00000488765 RGPD5Q99666 1765 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 SLC1A4P43007 532 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 ERVK-9P63128 1117 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 CCDC38Q502W7 563 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 PLBD2Q8NHP8 589 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 L3MBTL3Q96JM7 780 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-229ENST00000488765 ZSWIM5Q9P217 1185 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 RWDD2AQ9UIY3 292 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 PP2D1A8MPX8 630 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 LGALS16A8MUM7 142 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 RTN3O95197 1032 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-229ENST00000488765 TCP1P17987 556 aaKnown RBP17.78■□□□□ 0.44
MCF2L-229ENST00000488765 PTGDRQ13258 359 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 TEKT4Q8WW24 435 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 LPIN2Q92539 896 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 CHMP6Q96FZ7 201 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 NLRC4Q9NPP4 1024 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 CEP131Q9UPN4 1083 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 WDR17Q8IZU2 1322 aa17.78■□□□□ 0.44
MCF2L-229ENST00000488765 PALMO75781 387 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 KLHL29Q96CT2 875 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 DDX47Q9H0S4 455 aaKnown RBP17.77■□□□□ 0.44
MCF2L-229ENST00000488765 NDST4Q9H3R1 872 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 GDF3Q9NR23 364 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 CORO1CQ9ULV4 474 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-229ENST00000488765 ATP8A1Q9Y2Q0 1164 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 C2CD2Q9Y426 696 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 FAM208AQ9UK61 1670 aaKnown RBP17.77■□□□□ 0.44
MCF2L-229ENST00000488765 ERICH2A1L162 156 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 DNAJC8O75937 253 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-229ENST00000488765 CCDC57Q2TAC2 916 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 TRIM22Q8IYM9 498 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 CSGALNACT2Q8N6G5 542 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 RETREG2Q8NC44 543 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 PIGBQ92521 554 aa17.77■□□□□ 0.44
MCF2L-229ENST00000488765 PRMT1Q99873 361 aaKnown RBP17.77■□□□□ 0.44
MCF2L-229ENST00000488765 LAMA4Q16363 1823 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 MMEP08473 750 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 CHN1P15882 459 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 CNGA1P29973 690 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 SESN3P58005 492 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 SPAG1Q07617 926 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 ADCY1Q08828 1119 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 KLHDC7AQ5VTJ3 777 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 ANKS4BQ8N8V4 417 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 NOC4LQ9BVI4 516 aaKnown RBP17.77■□□□□ 0.43
MCF2L-229ENST00000488765 ECT2Q9H8V3 914 aa17.77■□□□□ 0.43
MCF2L-229ENST00000488765 DAPK3O43293 454 aa17.76■□□□□ 0.43
MCF2L-229ENST00000488765 RPN1P04843 607 aaKnown RBP17.76■□□□□ 0.43
MCF2L-229ENST00000488765 MIGA2Q7L4E1 593 aa17.76■□□□□ 0.43
MCF2L-229ENST00000488765 KANSL2Q9H9L4 492 aa17.76■□□□□ 0.43
MCF2L-229ENST00000488765 FOXO6A8MYZ6 492 aa17.76■□□□□ 0.43
MCF2L-229ENST00000488765 IGHMBP2P38935 993 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms