RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PDIA3P30101 505 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 LY6KQ17RY6 165 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 WWC2Q6AWC2 1192 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 OR6J1Q8NGC5 347 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 GPKOWQ92917 476 aaPredicted RBP eCLIP18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 IL17RAQ96F46 866 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 ZFP91Q96JP5 570 aaPredicted RBP18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 UPF3BQ9BZI7 483 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 CYP46A1Q9Y6A2 500 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 PQBP1O60828 265 aaKnown RBP18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 SEC24BO95487 1268 aa18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 ARHGAP1Q07960 439 aa18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 FAAP100Q0VG06 881 aa18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 NTRK3Q16288 839 aa18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 HEATR3Q7Z4Q2 680 aa18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 VTI1AQ96AJ9 217 aa18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-209ENST00000488627 ITGB8P26012 769 aa18.36■□□□□ 0.53
CTDSP1-209ENST00000488627 CCND2P30279 289 aa18.36■□□□□ 0.53
CTDSP1-209ENST00000488627 CPT1AP50416 773 aa18.36■□□□□ 0.53
CTDSP1-209ENST00000488627 PURAQ00577 322 aaKnown RBP18.36■□□□□ 0.53
CTDSP1-209ENST00000488627 SMARCC2Q8TAQ2 1214 aa18.36■□□□□ 0.53
CTDSP1-209ENST00000488627 CUL5Q93034 780 aa18.36■□□□□ 0.53
CTDSP1-209ENST00000488627 STXBP3O00186 592 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 KIAA0355O15063 1070 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 GH1P01241 217 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 CLTBP09497 229 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 ANAPC15P60006 121 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 PSMC6P62333 389 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 MDM2Q00987 491 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 SP2Q02086 613 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 ITGA7Q13683 1181 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 PKN1Q16512 942 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 AFG1LQ8WV93 481 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 EMID1Q96A84 441 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 INPP4AQ96PE3 977 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 BARHL2Q9NY43 387 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 MRVI1Q9Y6F6 885 aa18.35■□□□□ 0.53
CTDSP1-209ENST00000488627 DCDC2CA8MYV0 355 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 TGFB3P10600 412 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 UBE2SQ16763 222 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 PFKFB3Q16875 520 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 PCNX4Q63HM2 1172 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 KCNV1Q6PIU1 500 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 FAM126BQ8IXS8 530 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 RIC8AQ9NPQ8 531 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 PRDM5Q9NQX1 630 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 PDRG1Q9NUG6 133 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 PRKAG2Q9UGJ0 569 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 TBX21Q9UL17 535 aa18.34■□□□□ 0.53
CTDSP1-209ENST00000488627 TRIOBPQ9H2D6 2365 aa18.33■□□□□ 0.53
CTDSP1-209ENST00000488627 A0A1W2PPC1 479 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 hCG_1984214I3L0E3 225 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 KPNA6O60684 536 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 STAM2O75886 525 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 CD4P01730 458 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 MYL3P08590 195 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 IFNAR1P17181 557 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 ICAM3P32942 547 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 SEMA3FQ13275 785 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 PPP1R18Q6NYC8 613 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 XRRA1Q6P2D8 792 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 TEX2Q8IWB9 1127 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 ZNF713Q8N859 430 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 MTG1Q9BT17 334 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 ALDH8A1Q9H2A2 487 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 BCAS3Q9H6U6 928 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 NCOA5Q9HCD5 579 aaKnown RBP18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 TMEM39AQ9NV64 488 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 MYH6P13533 1939 aa18.33■□□□□ 0.52
CTDSP1-209ENST00000488627 MROH7Q68CQ1 1323 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 SPATA31C2B4DYI2 1134 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 MMP3P08254 477 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 SCG2P13521 617 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 FXR1P51114 621 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 NAPAP54920 295 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 LAMC2Q13753 1193 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 BRDTQ58F21 947 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 CELF3Q5SZQ8 465 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 MYSM1Q5VVJ2 828 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 BADQ92934 168 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 PHKBQ93100 1093 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 SEZ6LQ9BYH1 1024 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 PCDHA6Q9UN73 950 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 PCDHA8Q9Y5H6 950 aa18.32■□□□□ 0.52
CTDSP1-209ENST00000488627 SMCO2A6NFE2 343 aa18.31■□□□□ 0.52
CTDSP1-209ENST00000488627 HOXD8P13378 290 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-209ENST00000488627 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-209ENST00000488627 DHX37Q8IY37 1157 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-209ENST00000488627 PPTC7Q8NI37 304 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms