RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 RNF207Q6ZRF8 634 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 CHST3Q7LGC8 479 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 BMP8AQ7Z5Y6 402 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 TMEM192Q8IY95 271 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 AFG1LQ8WV93 481 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 DHX38Q92620 1227 aaKnown RBP10.97□□□□□ -0.65
COL17A1-207ENST00000488320 ATOH1Q92858 354 aaPredicted RBP10.97□□□□□ -0.65
COL17A1-207ENST00000488320 YME1L1Q96TA2 773 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 ALG1Q9BT22 464 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 FAM86C1Q9NVL1 165 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 LCTP09848 1927 aa10.97□□□□□ -0.65
COL17A1-207ENST00000488320 NFIBO00712 420 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 MBTPS2O43462 519 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 TCF15Q12870 199 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 SMAD2Q15796 467 aaKnown RBP10.96□□□□□ -0.65
COL17A1-207ENST00000488320 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 TRIM67Q6ZTA4 783 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 SESTD1Q86VW0 696 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 IRF2BPLQ9H1B7 796 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 IGFLR1Q9H665 355 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 HDAC6Q9UBN7 1215 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 GTF2IRD1Q9UHL9 959 aa10.96□□□□□ -0.65
COL17A1-207ENST00000488320 PATL2C9JE40 543 aaKnown RBP10.95□□□□□ -0.66
COL17A1-207ENST00000488320 RAB11FIP3O75154 756 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 GH1P01241 217 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 MMP3P08254 477 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 GNAT2P19087 354 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 PSEN2P49810 448 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 HTRA4P83105 476 aaPredicted RBP10.95□□□□□ -0.66
COL17A1-207ENST00000488320 RBL2Q08999 1139 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 PTK7Q13308 1070 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 SLC30A10Q6XR72 485 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 FBXO11Q86XK2 927 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 DBF4BQ8NFT6 615 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 CTAGE1Q96RT6 745 aa10.95□□□□□ -0.66
COL17A1-207ENST00000488320 MICAL3Q7RTP6 2002 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 EMSYQ7Z589 1322 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 TSPY2A6NKD2 308 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 GPAA1O43292 621 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 HMMRO75330 724 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 ARIH2O95376 493 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 RLBP1P12271 317 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 SLC16A2P36021 539 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 LTBRP36941 435 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 DLX2Q07687 328 aaPredicted RBP10.94□□□□□ -0.66
COL17A1-207ENST00000488320 DGKDQ16760 1214 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 LY6KQ17RY6 165 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 TTBK2Q6IQ55 1244 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 SEPT14Q6ZU15 432 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 DHX37Q8IY37 1157 aaKnown RBP10.94□□□□□ -0.66
COL17A1-207ENST00000488320 IFNL3Q8IZI9 196 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 FBXL6Q8N531 539 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 DNERQ8NFT8 737 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 SP7Q8TDD2 431 aaPredicted RBP10.94□□□□□ -0.66
COL17A1-207ENST00000488320 KAT2BQ92831 832 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 OSBP2Q969R2 916 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 KATNAL1Q9BW62 490 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 NACAP1Q9BZK3 213 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 RANBP17Q9H2T7 1088 aaKnown RBP10.94□□□□□ -0.66
COL17A1-207ENST00000488320 EPB41L4AQ9HCS5 686 aaPredicted RBP10.94□□□□□ -0.66
COL17A1-207ENST00000488320 CD207Q9UJ71 328 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 TECTAO75443 2155 aa10.94□□□□□ -0.66
COL17A1-207ENST00000488320 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 C5orf42Q9H799 3197 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 RSPH10B2B2RC85 870 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 RBAK-RBAKDNI3L0D1 243 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 CSPG5O95196 566 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 RSPH10BP0C881 870 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 CTNNB1P35222 781 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 THPOP40225 353 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 RPS6P62753 249 aaKnown RBP10.93□□□□□ -0.66
COL17A1-207ENST00000488320 ZXDAP98168 799 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 ZNF200P98182 395 aaPredicted RBP10.93□□□□□ -0.66
COL17A1-207ENST00000488320 SMAD4Q13485 552 aaKnown RBP10.93□□□□□ -0.66
COL17A1-207ENST00000488320 COL19A1Q14993 1142 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 SYDE2Q5VT97 1194 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 FIBCD1Q8N539 461 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 DCAF4Q8WV16 495 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 APPBP2Q92624 585 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 TOP1MTQ969P6 601 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
COL17A1-207ENST00000488320 PLIN4Q96Q06 1357 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 MYO7AQ13402 2215 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 RNF113AO15541 343 aaKnown RBP10.92□□□□□ -0.66
COL17A1-207ENST00000488320 RB1P06400 928 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 EDNRBP24530 442 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 NDUFV1P49821 464 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 HYAL1Q12794 435 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
COL17A1-207ENST00000488320 MBTPS1Q14703 1052 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 MFSD10Q14728 455 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 KIAA0753Q2KHM9 967 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 RASGRP2Q7LDG7 609 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 CLEC4DQ8WXI8 215 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 SEPT8Q92599 483 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 LMAN2LQ9H0V9 348 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 NAPBQ9H115 298 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 PNMA2Q9UL42 364 aa10.92□□□□□ -0.66
COL17A1-207ENST00000488320 MYH7BA7E2Y1 1941 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms