RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 LDLRAD1Q5T700 205 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 FBXO11Q86XK2 927 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 ERO1BQ86YB8 467 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 VSTM4Q8IW00 320 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 TNFRSF25Q93038 417 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 OPTNQ96CV9 577 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 SLF1Q9BQI6 1058 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 C6orf50Q9HD87 102 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 PCDHA6Q9UN73 950 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 PCDHA8Q9Y5H6 950 aa15.37■□□□□ 0.05
COPS7B-221ENST00000488111 MAGEA9P43362 315 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 TOB1P50616 345 aaPredicted RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 PPATQ06203 517 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 LEKR1Q6ZMV7 388 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 ZFP91Q96JP5 570 aaPredicted RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 WDR24Q96S15 920 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 GBA2Q9HCG7 927 aaPredicted RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 BIN2Q9UBW5 565 aaPredicted RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 PLA2G6O60733 806 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 ITGBL1O95965 494 aaPredicted RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 ATP1A3P13637 1013 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 PRPF38AQ8NAV1 312 aaKnown RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 LINC00301Q8NCQ3 95 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 HNRNPLLQ8WVV9 542 aaKnown RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 SLC10A4Q96EP9 437 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 RANBP17Q9H2T7 1088 aaKnown RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 GPBP1L1Q9HC44 474 aaPredicted RBP15.36■□□□□ 0.05
COPS7B-221ENST00000488111 TMEM260Q9NX78 707 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 OTOFQ9HC10 1997 aa15.36■□□□□ 0.05
COPS7B-221ENST00000488111 hCG_1984214I3L0E3 225 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 GNA11P29992 359 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
COPS7B-221ENST00000488111 SF3A1Q15459 793 aaKnown RBP15.35■□□□□ 0.05
COPS7B-221ENST00000488111 UBE2SQ16763 222 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 TREML2Q5T2D2 321 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 CST9Q5W186 159 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 ZNF713Q8N859 430 aaPredicted RBP15.35■□□□□ 0.05
COPS7B-221ENST00000488111 RBM46Q8TBY0 533 aaKnown RBP15.35■□□□□ 0.05
COPS7B-221ENST00000488111 WNK4Q96J92 1243 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 C12orf42Q96LP6 360 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 M0R2N6 131 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 WNT7AO00755 349 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 GJA5P36382 358 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 ADCY7P51828 1080 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 UBASH3AP57075 661 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 GNG11P61952 73 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 ANO1Q5XXA6 986 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 GADL1Q6ZQY3 521 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 CPXCR1Q8N123 301 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 ZBTB9Q96C00 473 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 PHIPQ8WWQ0 1821 aa15.35■□□□□ 0.05
COPS7B-221ENST00000488111 BIN1O00499 593 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 SH3D19Q5HYK7 790 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 GALNT17Q6IS24 598 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 C2orf69Q8N8R5 385 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 DAGLBQ8NCG7 672 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 KCNG4Q8TDN1 519 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 ATG4CQ96DT6 458 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 AGBL1Q96MI9 1066 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 PSTPIP2Q9H939 334 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 PPP1R9AQ9ULJ8 1098 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 PCDHB6Q9Y5E3 794 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L15C9J2P7 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L13C9JLJ4 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L11C9JVI0 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L18D6R9N7 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L22D6RA61 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L17D6RBQ6 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L19D6RCP7 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L20D6RJB6 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 YEATS4O95619 227 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 GUCY2CP25092 1073 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L24Q0WX57 530 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 TTC31Q49AM3 519 aaPredicted RBP15.34■□□□□ 0.05
COPS7B-221ENST00000488111 USP17L6PQ6QN14 398 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 PAPPA2Q9BXP8 1791 aa15.34■□□□□ 0.05
COPS7B-221ENST00000488111 CCDC194A0A1B0GVG4 234 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 ESYT2A0FGR8 921 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 CHRM1P11229 460 aaPredicted RBP15.33■□□□□ 0.04
COPS7B-221ENST00000488111 STK38Q15208 465 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 RILPL1Q5EBL4 403 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 CATSPERGQ6ZRH7 1159 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 PAXIP1Q6ZW49 1069 aaPredicted RBP15.33■□□□□ 0.04
COPS7B-221ENST00000488111 TEX2Q8IWB9 1127 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 REXO1Q8N1G1 1221 aaKnown RBP15.33■□□□□ 0.04
COPS7B-221ENST00000488111 RAVER2Q9HCJ3 691 aaKnown RBP15.33■□□□□ 0.04
COPS7B-221ENST00000488111 RIC8AQ9NPQ8 531 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 ZNF202O95125 648 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 TBX2Q13207 712 aaPredicted RBP15.33■□□□□ 0.04
COPS7B-221ENST00000488111 PPIL2Q13356 520 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 INF2Q27J81 1249 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 BEND6Q5SZJ8 279 aaPredicted RBP15.33■□□□□ 0.04
COPS7B-221ENST00000488111 PPP1R18Q6NYC8 613 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 PACS2Q86VP3 889 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 FAM177A1Q8N128 213 aaPredicted RBP15.33■□□□□ 0.04
COPS7B-221ENST00000488111 CUL5Q93034 780 aa15.33■□□□□ 0.04
COPS7B-221ENST00000488111 DHX58Q96C10 678 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms