RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 GPR42O15529 346 aa6.09□□□□□ -1.43
SMC4-220ENST00000488017 EPHX1P07099 455 aa6.09□□□□□ -1.43
SMC4-220ENST00000488017 SLC7A5Q01650 507 aa6.09□□□□□ -1.43
SMC4-220ENST00000488017 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
SMC4-220ENST00000488017 STK32CQ86UX6 486 aa6.09□□□□□ -1.43
SMC4-220ENST00000488017 DEF6Q9H4E7 631 aa6.09□□□□□ -1.43
SMC4-220ENST00000488017 MARCH2Q9P0N8 246 aa6.09□□□□□ -1.43
SMC4-220ENST00000488017 AMHP03971 560 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 CYP1A1P04798 512 aaPredicted RBP6.08□□□□□ -1.44
SMC4-220ENST00000488017 SELENOPP49908 381 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 PPP2CBP62714 309 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 PPP2CAP67775 309 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 COL9A2Q14055 689 aaPredicted RBP6.08□□□□□ -1.44
SMC4-220ENST00000488017 PRAMEF18Q5VWM3 479 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 ZNF575Q86XF7 245 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 RIOX2Q8IUF8 465 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 C19orf47Q8N9M1 422 aaKnown RBP6.08□□□□□ -1.44
SMC4-220ENST00000488017 DPF3Q92784 378 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 COPS5Q92905 334 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 MBD6Q96DN6 1003 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 FGD4Q96M96 766 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 YTHDC1Q96MU7 727 aaKnown RBP6.08□□□□□ -1.44
SMC4-220ENST00000488017 CLEC1BQ9P126 229 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 C11orf21Q9P2W6 132 aa6.08□□□□□ -1.44
SMC4-220ENST00000488017 CYP7B1O75881 506 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 THBDP07204 575 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 NKX3-2P78367 333 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 ADAM9Q13443 819 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 ARHGEF18Q6ZSZ5 1173 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 CRBNQ96SW2 442 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 BCL2L13Q9BXK5 485 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 TMEM168Q9H0V1 697 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 L2HGDHQ9H9P8 463 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 SUGT1Q9Y2Z0 365 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 TCAF1Q9Y4C2 921 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 TESMINQ9Y4I5 508 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 HS3ST3A1Q9Y663 406 aa6.07□□□□□ -1.44
SMC4-220ENST00000488017 C22orf46C9J442 243 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 PLS3P13797 630 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 IL13P35225 146 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 HNRNPA0Q13151 305 aaKnown RBP6.06□□□□□ -1.44
SMC4-220ENST00000488017 R3HDM1Q15032 1099 aaKnown RBP6.06□□□□□ -1.44
SMC4-220ENST00000488017 CCDC27Q2M243 656 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 CR1LQ2VPA4 569 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 MROH9Q5TGP6 573 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 SLFN13Q68D06 897 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 MBLAC2Q68D91 279 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 ZNF585AQ6P3V2 769 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 MILR1Q7Z6M3 343 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 TMEM87AQ8NBN3 555 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 IGDCC4Q8TDY8 1250 aa6.06□□□□□ -1.44
SMC4-220ENST00000488017 ING1Q9UK53 422 aaPredicted RBP6.06□□□□□ -1.44
SMC4-220ENST00000488017 PATE3B3GLJ2 98 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 MUSKO15146 869 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 ZNF76P36508 570 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 STAT5AP42229 794 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 SMN1Q16637 294 aaKnown RBP6.05□□□□□ -1.44
SMC4-220ENST00000488017 TEX2Q8IWB9 1127 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 PALM2Q8IXS6 379 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 CRACR2BQ8N4Y2 399 aaPredicted RBP6.05□□□□□ -1.44
SMC4-220ENST00000488017 OR6P1Q8NGX9 317 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 GIPC2Q8TF65 315 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 KLHL6Q8WZ60 621 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 CLIC6Q96NY7 704 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 WRNIP1Q96S55 665 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 AKT3Q9Y243 479 aa6.05□□□□□ -1.44
SMC4-220ENST00000488017 A0A1W2PQH9 124 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 SCRN1Q12765 414 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 LDLRAD1Q5T700 205 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 IQCEQ6IPM2 695 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 POMZP3Q6PJE2 187 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 KBTBD2Q8IY47 623 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 Q8N1Y9 231 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 KLHL36Q8N4N3 616 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 ZNF513Q8N8E2 541 aaPredicted RBP6.04□□□□□ -1.44
SMC4-220ENST00000488017 YIPF4Q9BSR8 244 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 JADE2Q9NQC1 790 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 PCDHB10Q9UN67 800 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 ZNF652Q9Y2D9 606 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 EMC9Q9Y3B6 208 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 X6R8D5 127 aa6.04□□□□□ -1.44
SMC4-220ENST00000488017 ANKRD34BA5PLL1 514 aa6.03□□□□□ -1.44
SMC4-220ENST00000488017 EIF6P56537 245 aaKnown RBP6.03□□□□□ -1.44
SMC4-220ENST00000488017 PURAQ00577 322 aaKnown RBP6.03□□□□□ -1.44
SMC4-220ENST00000488017 SPATA32Q96LK8 384 aa6.03□□□□□ -1.44
SMC4-220ENST00000488017 WWC2-AS2Q96NR7 200 aa6.03□□□□□ -1.44
SMC4-220ENST00000488017 GPRC5CQ9NQ84 441 aa6.03□□□□□ -1.44
SMC4-220ENST00000488017 METTL5Q9NRN9 209 aaKnown RBP6.03□□□□□ -1.44
SMC4-220ENST00000488017 TIMM13Q9Y5L4 95 aaPredicted RBP6.03□□□□□ -1.44
SMC4-220ENST00000488017 ZNF623O75123 536 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 KCNH1O95259 989 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 GIPRP48546 466 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 GTF2A2P52657 109 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 TGFB2P61812 414 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 RPL11P62913 178 aaKnown RBP6.02□□□□□ -1.45
SMC4-220ENST00000488017 CHRNA2Q15822 529 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 INF2Q27J81 1249 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 SPDYAQ5MJ70 313 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 CCDC81Q6ZN84 652 aa6.02□□□□□ -1.45
SMC4-220ENST00000488017 TOE1Q96GM8 510 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms