RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 TRMT44Q8IYL2 757 aaKnown RBP12.53□□□□□ -0.4
HDLBP-242ENST00000488013 SLFN12Q8IYM2 578 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 SPATA32Q96LK8 384 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 FAM20AQ96MK3 541 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 PDCD2LQ9BRP1 358 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 RAB34Q9BZG1 259 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 DDX25Q9UHL0 483 aaKnown RBP12.53□□□□□ -0.4
HDLBP-242ENST00000488013 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
HDLBP-242ENST00000488013 GOLGA6L4A6NEF3 574 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 SPTLC2O15270 562 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
HDLBP-242ENST00000488013 TAL1P17542 331 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-242ENST00000488013 EDNRBP24530 442 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 MCM7P33993 719 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 PRMT2P55345 433 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 PDE4DQ08499 809 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 PGM5Q15124 567 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 ZNF792Q3KQV3 632 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 EARS2Q5JPH6 523 aaKnown RBP12.52□□□□□ -0.41
HDLBP-242ENST00000488013 MORN1Q5T089 497 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 TMEM87AQ8NBN3 555 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 LINC00301Q8NCQ3 95 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 ERO1AQ96HE7 468 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 COL20A1Q9P218 1284 aa12.52□□□□□ -0.41
HDLBP-242ENST00000488013 BAZ2BQ9UIF8 2168 aaKnown RBP12.52□□□□□ -0.41
HDLBP-242ENST00000488013 GPR25O00155 361 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 MEIS1O00470 390 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 TBC1D8O95759 1140 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 OR52Z1P0C646 297 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 TGFB3P10600 412 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 EIF2AK2P19525 551 aaKnown RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 PSMC4P43686 418 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 ALDH5A1P51649 535 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 HTRA3P83110 453 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 ATP2C1P98194 919 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 ZNF174Q15697 407 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 CALCRLQ16602 461 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 TMEM266Q2M3C6 531 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 FOXD4L6Q3SYB3 417 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 FAM173BQ6P4H8 233 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 MAMDC4Q6UXC1 1216 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 FOXD4L3Q6VB84 417 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 DTHD1Q6ZMT9 781 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 MORC4Q8TE76 937 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 LEO1Q8WVC0 666 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 GPRASP2Q96D09 838 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 MXRA8Q9BRK3 442 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 JADE2Q9NQC1 790 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
HDLBP-242ENST00000488013 PCDHB6Q9Y5E3 794 aa12.51□□□□□ -0.41
HDLBP-242ENST00000488013 PTPRFP10586 1907 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 ADAMTS3O15072 1205 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 FIBPO43427 364 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 PEX10O60683 326 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 FKTNO75072 461 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 ME1P48163 572 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 PTGDRQ13258 359 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 MTMR1Q13613 665 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 PTPAQ15257 358 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 PRR16Q569H4 304 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 OLFML2BQ68BL8 750 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 GIMAP8Q8ND71 665 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-242ENST00000488013 PGBD1Q96JS3 809 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 AK8Q96MA6 479 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 INPP4AQ96PE3 977 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-242ENST00000488013 RIT2Q99578 217 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 APBA2Q99767 749 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 TCEAL9Q9UHQ7 104 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 NRBP1Q9UHY1 535 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 SRPRBQ9Y5M8 271 aaKnown RBP12.5□□□□□ -0.41
HDLBP-242ENST00000488013 UBIAD1Q9Y5Z9 338 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 CLIC4Q9Y696 253 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 SYNGAP1Q96PV0 1343 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 A0A0G2JMZ2 1700 aa12.5□□□□□ -0.41
HDLBP-242ENST00000488013 SOWAHBA6NEL2 793 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 SLC26A4O43511 780 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 PGK2P07205 417 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 MYCLP12524 364 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-242ENST00000488013 ICAM3P32942 547 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 LONP1P36776 959 aaKnown RBP12.49□□□□□ -0.41
HDLBP-242ENST00000488013 CNTN2Q02246 1040 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 CEBPZQ03701 1054 aaKnown RBP12.49□□□□□ -0.41
HDLBP-242ENST00000488013 PDIA5Q14554 519 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 ADALQ6DHV7 355 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 PLA2G4DQ86XP0 818 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 USP6NLQ92738 828 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 SENP7Q9BQF6 1050 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 PYM1Q9BRP8 204 aaKnown RBP12.49□□□□□ -0.41
HDLBP-242ENST00000488013 VTA1Q9NP79 307 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 KCNMB3Q9NPA1 279 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 WBP1LQ9NX94 342 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms