RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 IL17RAQ96F46 866 aa19.63■□□□□ 0.73
HMG20B-212ENST00000487894 GLT1D1Q96MS3 346 aa19.63■□□□□ 0.73
HMG20B-212ENST00000487894 V9GY48 417 aaPredicted RBP19.63■□□□□ 0.73
HMG20B-212ENST00000487894 ELP1O95163 1332 aa19.62■□□□□ 0.73
HMG20B-212ENST00000487894 CCND2P30279 289 aa19.62■□□□□ 0.73
HMG20B-212ENST00000487894 PPP1R18Q6NYC8 613 aa19.62■□□□□ 0.73
HMG20B-212ENST00000487894 CHRDL2Q6WN34 429 aa19.62■□□□□ 0.73
HMG20B-212ENST00000487894 CUL5Q93034 780 aa19.62■□□□□ 0.73
HMG20B-212ENST00000487894 PRO3102Q9H379 93 aa19.62■□□□□ 0.73
HMG20B-212ENST00000487894 PSTPIP2Q9H939 334 aa19.62■□□□□ 0.73
HMG20B-212ENST00000487894 hCG_1984214I3L0E3 225 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 STXBP3O00186 592 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 EIF5BO60841 1220 aaKnown RBP19.61■□□□□ 0.73
HMG20B-212ENST00000487894 NAPAP54920 295 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 NTRK3Q16288 839 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 UBE2SQ16763 222 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 LY6KQ17RY6 165 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 C8orf34Q49A92 452 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 CXCL17Q6UXB2 119 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 ZNF713Q8N859 430 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-212ENST00000487894 NCOA5Q9HCD5 579 aaKnown RBP19.61■□□□□ 0.73
HMG20B-212ENST00000487894 PDRG1Q9NUG6 133 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 COLQQ9Y215 455 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-212ENST00000487894 TRIOBPQ9H2D6 2365 aa19.61■□□□□ 0.73
HMG20B-212ENST00000487894 A0A0U1RQG5 324 aaPredicted RBP19.6■□□□□ 0.73
HMG20B-212ENST00000487894 ZEB2O60315 1214 aa19.6■□□□□ 0.73
HMG20B-212ENST00000487894 CPT1AP50416 773 aa19.6■□□□□ 0.73
HMG20B-212ENST00000487894 CCT2P78371 535 aaKnown RBP19.6■□□□□ 0.73
HMG20B-212ENST00000487894 MRPS9P82933 396 aaKnown RBP19.6■□□□□ 0.73
HMG20B-212ENST00000487894 TLE2Q04725 743 aa19.6■□□□□ 0.73
HMG20B-212ENST00000487894 ARHGAP1Q07960 439 aa19.6■□□□□ 0.73
HMG20B-212ENST00000487894 PFKFB3Q16875 520 aaPredicted RBP19.6■□□□□ 0.73
HMG20B-212ENST00000487894 ZFP91Q96JP5 570 aaPredicted RBP19.6■□□□□ 0.73
HMG20B-212ENST00000487894 LARP6Q9BRS8 491 aaKnown RBP19.6■□□□□ 0.73
HMG20B-212ENST00000487894 PDLIM7Q9NR12 457 aa19.6■□□□□ 0.73
HMG20B-212ENST00000487894 BARHL2Q9NY43 387 aa19.6■□□□□ 0.73
HMG20B-212ENST00000487894 DDX41Q9UJV9 622 aaKnown RBP19.6■□□□□ 0.73
HMG20B-212ENST00000487894 MRVI1Q9Y6F6 885 aa19.6■□□□□ 0.73
HMG20B-212ENST00000487894 A6NJR5 290 aa19.59■□□□□ 0.73
HMG20B-212ENST00000487894 CABYRO75952 493 aa19.59■□□□□ 0.73
HMG20B-212ENST00000487894 GH1P01241 217 aa19.59■□□□□ 0.73
HMG20B-212ENST00000487894 ANKRD33Q7Z3H0 272 aa19.59■□□□□ 0.73
HMG20B-212ENST00000487894 PHKBQ93100 1093 aa19.59■□□□□ 0.73
HMG20B-212ENST00000487894 ZNF274Q96GC6 653 aaPredicted RBP19.59■□□□□ 0.73
HMG20B-212ENST00000487894 PRPF3O43395 683 aaKnown RBP19.58■□□□□ 0.72
HMG20B-212ENST00000487894 PQBP1O60828 265 aaKnown RBP19.58■□□□□ 0.72
HMG20B-212ENST00000487894 SCG2P13521 617 aa19.58■□□□□ 0.72
HMG20B-212ENST00000487894 IFNAR1P17181 557 aa19.58■□□□□ 0.72
HMG20B-212ENST00000487894 MAGEA10P43363 369 aaPredicted RBP19.58■□□□□ 0.72
HMG20B-212ENST00000487894 CDK7P50613 346 aa19.58■□□□□ 0.72
HMG20B-212ENST00000487894 PURAQ00577 322 aaKnown RBP19.58■□□□□ 0.72
HMG20B-212ENST00000487894 PKN1Q16512 942 aa19.58■□□□□ 0.72
HMG20B-212ENST00000487894 PCNX4Q63HM2 1172 aa19.58■□□□□ 0.72
HMG20B-212ENST00000487894 INPP4AQ96PE3 977 aaPredicted RBP19.58■□□□□ 0.72
HMG20B-212ENST00000487894 GDF15Q99988 308 aa19.58■□□□□ 0.72
HMG20B-212ENST00000487894 RNF26Q9BY78 433 aaPredicted RBP19.58■□□□□ 0.72
HMG20B-212ENST00000487894 RIC8AQ9NPQ8 531 aa19.58■□□□□ 0.72
HMG20B-212ENST00000487894 POLR3EQ9NVU0 708 aa19.58■□□□□ 0.72
HMG20B-212ENST00000487894 GRIN2DO15399 1336 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 ARVCFO00192 962 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 STAM2O75886 525 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 CLTBP09497 229 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 ADCY7P51828 1080 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 SH3RF1Q7Z6J0 888 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 SLC43A3Q8NBI5 491 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 EMID1Q96A84 441 aaPredicted RBP19.57■□□□□ 0.72
HMG20B-212ENST00000487894 VTI1AQ96AJ9 217 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 TOX2Q96NM4 488 aa19.57■□□□□ 0.72
HMG20B-212ENST00000487894 ALDH8A1Q9H2A2 487 aaPredicted RBP19.57■□□□□ 0.72
HMG20B-212ENST00000487894 PRDM5Q9NQX1 630 aaPredicted RBP19.57■□□□□ 0.72
HMG20B-212ENST00000487894 RBM27Q9P2N5 1060 aaKnown RBP19.57■□□□□ 0.72
HMG20B-212ENST00000487894 MROH7Q68CQ1 1323 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 TRIM43BA6NCK2 446 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 SPDYE3A6NKU9 549 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 PPFIA3O75145 1194 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 MMP3P08254 477 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 MYL3P08590 195 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 UBA1P22314 1058 aaKnown RBP19.56■□□□□ 0.72
HMG20B-212ENST00000487894 PSMC6P62333 389 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 FAAP100Q0VG06 881 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 STK3Q13188 491 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 SEMA3FQ13275 785 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 BRDTQ58F21 947 aaPredicted RBP19.56■□□□□ 0.72
HMG20B-212ENST00000487894 XRRA1Q6P2D8 792 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 KCNV1Q6PIU1 500 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 TEX2Q8IWB9 1127 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 FAM126BQ8IXS8 530 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 AFG1LQ8WV93 481 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 TRIM43Q96BQ3 446 aaPredicted RBP19.56■□□□□ 0.72
HMG20B-212ENST00000487894 SLC26A6Q9BXS9 759 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 PCDHA6Q9UN73 950 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 PCDHA8Q9Y5H6 950 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 TANC1Q9C0D5 1861 aa19.56■□□□□ 0.72
HMG20B-212ENST00000487894 SMCO2A6NFE2 343 aa19.55■□□□□ 0.72
HMG20B-212ENST00000487894 ICAM3P32942 547 aa19.55■□□□□ 0.72
HMG20B-212ENST00000487894 CLK2P49760 499 aaKnown RBP19.55■□□□□ 0.72
HMG20B-212ENST00000487894 AK2P54819 239 aa19.55■□□□□ 0.72
HMG20B-212ENST00000487894 SP2Q02086 613 aa19.55■□□□□ 0.72
HMG20B-212ENST00000487894 ITGA7Q13683 1181 aa19.55■□□□□ 0.72
HMG20B-212ENST00000487894 GNPTABQ3T906 1256 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms