RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ZNF451Q9Y4E5 1061 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 KANK1Q14678 1352 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 NRKQ7Z2Y5 1582 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 MYOM1P52179 1685 aa7.16□□□□□ -1.26
BRCA1-217ENST00000487825 H0Y8X5 98 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 GSTM1P09488 218 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 CD247P20963 164 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 GLDCP23378 1020 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 RTP2Q5QGT7 225 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 CWF19L1Q69YN2 538 aaKnown RBP7.15□□□□□ -1.26
BRCA1-217ENST00000487825 SPATA32Q96LK8 384 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 SGPP1Q9BX95 441 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 SRRTQ9BXP5 876 aaKnown RBP7.15□□□□□ -1.26
BRCA1-217ENST00000487825 CD320Q9NPF0 282 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 PCDHB10Q9UN67 800 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 SMG5Q9UPR3 1016 aaKnown RBP7.15□□□□□ -1.26
BRCA1-217ENST00000487825 TAF6LQ9Y6J9 622 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 KIF15Q9NS87 1388 aa7.15□□□□□ -1.26
BRCA1-217ENST00000487825 THSD7AQ9UPZ6 1657 aa7.15□□□□□ -1.27
BRCA1-217ENST00000487825 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 ENDOUP21128 410 aaKnown RBP7.14□□□□□ -1.27
BRCA1-217ENST00000487825 NASPP49321 788 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-217ENST00000487825 DLG4P78352 724 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 KCNA10Q16322 511 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 GNPTABQ3T906 1256 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 HSF5Q4G112 596 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-217ENST00000487825 GALNT18Q6P9A2 607 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 FIBCD1Q8N539 461 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.14□□□□□ -1.27
BRCA1-217ENST00000487825 RASGRP4Q8TDF6 673 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 SLC12A9Q9BXP2 914 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 ACBD3Q9H3P7 528 aa7.14□□□□□ -1.27
BRCA1-217ENST00000487825 ADGRL2O95490 1459 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 PARD3Q8TEW0 1356 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 WTIPA6NIX2 430 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-217ENST00000487825 PEX10O60683 326 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 PRKCAP17252 672 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 GJA8P48165 433 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 GIPRP48546 466 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 PPP2R5EQ16537 467 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 SPOCD1Q6ZMY3 1216 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 C1QL4Q86Z23 238 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 NAT16Q8N8M0 369 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 TMEM52Q8NDY8 209 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 ZSCAN18Q8TBC5 510 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-217ENST00000487825 CPLX3Q8WVH0 158 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 ZDHHC15Q96MV8 337 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 NOL6Q9H6R4 1146 aaKnown RBP7.13□□□□□ -1.27
BRCA1-217ENST00000487825 CRTAC1Q9NQ79 661 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 PPP1R1BQ9UD71 204 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-217ENST00000487825 FHOD1Q9Y613 1164 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 GOLGB1Q14789 3259 aaKnown RBP7.13□□□□□ -1.27
BRCA1-217ENST00000487825 RGPD3A6NKT7 1758 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-217ENST00000487825 RGPD4Q7Z3J3 1758 aa7.13□□□□□ -1.27
BRCA1-217ENST00000487825 A0A1W2PQH9 124 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 ITGA4P13612 1032 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 PNLIPP16233 465 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 PPP2R5DQ14738 602 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 TCEAL1Q15170 157 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 VPS72Q15906 364 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 EZH2Q15910 746 aaKnown RBP7.12□□□□□ -1.27
BRCA1-217ENST00000487825 SLCO6A1Q86UG4 719 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 ADCY4Q8NFM4 1077 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 INPP5FQ9Y2H2 1132 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 SHANK3Q9BYB0 1731 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 E9PCH4 1651 aa7.12□□□□□ -1.27
BRCA1-217ENST00000487825 NEXMIFQ5QGS0 1516 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 A0A1W2PQ45 241 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-217ENST00000487825 A0A1W2PQY0 241 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 CBFA2T2O43439 604 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 SEMA7AO75326 666 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 ZSCAN22P10073 491 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-217ENST00000487825 LINC00310P59036 64 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 LCNL1Q6ZST4 164 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 NUP43Q8NFH3 380 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 ORAI2Q96SN7 254 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 HAUS7Q99871 368 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 TGIF2Q9GZN2 237 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 SPON1Q9HCB6 807 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 SF3B6Q9Y3B4 125 aaKnown RBP7.11□□□□□ -1.27
BRCA1-217ENST00000487825 SLC12A7Q9Y666 1083 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 CDC42BPGQ6DT37 1551 aa7.11□□□□□ -1.27
BRCA1-217ENST00000487825 KIF1AQ12756 1690 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 TEX51A0A1B0GUA7 166 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 KCNQ2O43526 872 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 CD3EP07766 207 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 ARL4AP40617 200 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 NOP2P46087 812 aaKnown RBP7.1□□□□□ -1.27
BRCA1-217ENST00000487825 SRSF3P84103 164 aaKnown RBP7.1□□□□□ -1.27
BRCA1-217ENST00000487825 CYP4F8P98187 520 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 CIAPIN1Q6FI81 312 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 ADAT2Q7Z6V5 191 aaKnown RBP7.1□□□□□ -1.27
BRCA1-217ENST00000487825 SHDQ96IW2 340 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 FGD4Q96M96 766 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 FCRL3Q96P31 734 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-217ENST00000487825 CAMKK2Q96RR4 588 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 CCSER2Q9H7U1 834 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 PHAXQ9H814 394 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms