RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 NFE2L3Q9Y4A8 694 aa22.84■■□□□ 1.25
PHF1-209ENST00000487667 PVALEFA0A1B0GWK0 134 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 PPP1R3GB7ZBB8 358 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 SERPINC1P01008 464 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 NF2P35240 595 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 SAMD1Q6SPF0 538 aaPredicted RBP22.83■■□□□ 1.25
PHF1-209ENST00000487667 KRT26Q7Z3Y9 468 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 RAD54LQ92698 747 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 LENG9Q96B70 501 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 PNMA5Q96PV4 448 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 RWDD2AQ9UIY3 292 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 SSC5DA1L4H1 1573 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 SYNRGQ9UMZ2 1314 aa22.83■■□□□ 1.25
PHF1-209ENST00000487667 CASP1P29466 404 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 GSDMDP57764 484 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 FANCLQ9NW38 375 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 CSADQ9Y600 493 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 DCAF8L1A6NGE4 600 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 FAM86B1E9PN63 330 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 USP2O75604 605 aaPredicted RBP22.82■■□□□ 1.24
PHF1-209ENST00000487667 OFD1O75665 1012 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 FAM86B2P0C5J1 330 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 CDK11BP21127 795 aaKnown RBP22.82■■□□□ 1.24
PHF1-209ENST00000487667 EPHX2P34913 555 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 CCT6AP40227 531 aaKnown RBP22.82■■□□□ 1.24
PHF1-209ENST00000487667 IREB2P48200 963 aaKnown RBP22.82■■□□□ 1.24
PHF1-209ENST00000487667 SH3D19Q5HYK7 790 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 PRAMEF18Q5VWM3 479 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.82■■□□□ 1.24
PHF1-209ENST00000487667 AGBL1Q96MI9 1066 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 PLIN2Q99541 437 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 HSD3B7Q9H2F3 369 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 BMP2KQ9NSY1 1161 aaPredicted RBP22.82■■□□□ 1.24
PHF1-209ENST00000487667 EXOC1Q9NV70 894 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 IFNKQ9P0W0 207 aa22.82■■□□□ 1.24
PHF1-209ENST00000487667 ZNF18P17022 549 aa22.81■■□□□ 1.24
PHF1-209ENST00000487667 FMR1Q06787 632 aaKnown RBP eCLIP22.81■■□□□ 1.242e-6■□□□□ 10.3
PHF1-209ENST00000487667 PAK1Q13153 545 aa22.81■■□□□ 1.24
PHF1-209ENST00000487667 COG2Q14746 738 aa22.81■■□□□ 1.24
PHF1-209ENST00000487667 BLOC1S4Q9NUP1 217 aa22.81■■□□□ 1.24
PHF1-209ENST00000487667 AFG3L2Q9Y4W6 797 aa22.81■■□□□ 1.24
PHF1-209ENST00000487667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.81■■□□□ 1.243e-6■□□□□ 10.3
PHF1-209ENST00000487667 VWA5AO00534 786 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 TERF1P54274 439 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 UBASH3AP57075 661 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 ASIC1P78348 528 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 KMT5BQ4FZB7 885 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 CEP55Q53EZ4 464 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 COBLL1Q53SF7 1204 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 NIPA1Q7RTP0 329 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 GIMAP8Q8ND71 665 aaPredicted RBP22.8■■□□□ 1.24
PHF1-209ENST00000487667 NAP1L5Q96NT1 182 aaPredicted RBP22.8■■□□□ 1.24
PHF1-209ENST00000487667 CTAGE1Q96RT6 745 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 XPO4Q9C0E2 1151 aaKnown RBP22.8■■□□□ 1.24
PHF1-209ENST00000487667 HOXC10Q9NYD6 342 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.8■■□□□ 1.24
PHF1-209ENST00000487667 IGLV3-22A0A075B6J6 115 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 MSH4O15457 936 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 KLRC4O43908 158 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 ALAS1P13196 640 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 HMGCS2P54868 508 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 TKFCQ3LXA3 575 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 CLEC4DQ8WXI8 215 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 ADAMTS5Q9UNA0 930 aa22.8■■□□□ 1.24
PHF1-209ENST00000487667 PHIPQ8WWQ0 1821 aa22.79■■□□□ 1.24
PHF1-209ENST00000487667 RPTORQ8N122 1335 aa22.79■■□□□ 1.24
PHF1-209ENST00000487667 PSMA7O14818 248 aa22.79■■□□□ 1.24
PHF1-209ENST00000487667 ATP2A1O14983 1001 aa22.79■■□□□ 1.24
PHF1-209ENST00000487667 DSG3P32926 999 aa22.79■■□□□ 1.24
PHF1-209ENST00000487667 SPAG1Q07617 926 aa22.79■■□□□ 1.24
PHF1-209ENST00000487667 TPD52L1Q16890 204 aaPredicted RBP22.79■■□□□ 1.24
PHF1-209ENST00000487667 DHTKD1Q96HY7 919 aaPredicted RBP22.79■■□□□ 1.24
PHF1-209ENST00000487667 RAVER2Q9HCJ3 691 aaKnown RBP22.79■■□□□ 1.24
PHF1-209ENST00000487667 IQCA1LA6NCM1 817 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 BCRP11274 1271 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 CD44P16070 742 aaKnown RBP22.78■■□□□ 1.24
PHF1-209ENST00000487667 MUTP22033 750 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 RPA1P27694 616 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 PSMD2Q13200 908 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 KLHL10Q6JEL2 608 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 CATSPERGQ6ZRH7 1159 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 UNC13DQ70J99 1090 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 CCDC186Q7Z3E2 898 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 CPXCR1Q8N123 301 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 ADSSL1Q8N142 457 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 ANKRD20A12PQ8NF67 263 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 TBC1D5Q92609 795 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 WDR11Q9BZH6 1224 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 TAL1P17542 331 aaPredicted RBP22.78■■□□□ 1.24
PHF1-209ENST00000487667 SPIRE1Q08AE8 756 aa22.78■■□□□ 1.24
PHF1-209ENST00000487667 POLR2AP24928 1970 aaKnown RBP22.77■■□□□ 1.24
PHF1-209ENST00000487667 MEIS1O00470 390 aa22.77■■□□□ 1.24
PHF1-209ENST00000487667 PDE4DQ08499 809 aa22.77■■□□□ 1.24
PHF1-209ENST00000487667 EAPPQ56P03 285 aaPredicted RBP22.77■■□□□ 1.24
PHF1-209ENST00000487667 XRRA1Q6P2D8 792 aa22.77■■□□□ 1.24
PHF1-209ENST00000487667 NOC3LQ8WTT2 800 aaKnown RBP22.77■■□□□ 1.24
PHF1-209ENST00000487667 SLC5A5Q92911 643 aa22.77■■□□□ 1.24
PHF1-209ENST00000487667 POLR3CQ9BUI4 534 aaPredicted RBP22.77■■□□□ 1.24
PHF1-209ENST00000487667 TAF1DQ9H5J8 278 aaPredicted RBP22.77■■□□□ 1.24
PHF1-209ENST00000487667 RBBP6Q7Z6E9 1792 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms