RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 LRRCC1Q9C099 1032 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 PUS7LQ9H0K6 701 aaKnown RBP6.63□□□□□ -1.35
MACF1-221ENST00000487656 MTIF3Q9H2K0 278 aaKnown RBP6.63□□□□□ -1.35
MACF1-221ENST00000487656 ZBTB40Q9NUA8 1239 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 CLIP2Q9UDT6 1046 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 MSRAQ9UJ68 235 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 FEM1BQ9UK73 627 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 SYNRGQ9UMZ2 1314 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 USTQ9Y2C2 406 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 RIPK3Q9Y572 518 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 UNC80Q8N2C7 3258 aa6.63□□□□□ -1.35
MACF1-221ENST00000487656 SMIM22K7EJ46 135 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 TNFRSF10AO00220 468 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 ZEB2O60315 1214 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 FGBP02675 491 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 APPP05067 770 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 SLC3A2P08195 630 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 GNAT2P19087 354 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 FSHRP23945 695 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 GRM5P41594 1212 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 OAZ1P54368 228 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 GJA9P57773 515 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 ELOAQ14241 798 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 LRRFIP1Q32MZ4 808 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 TMEM240Q5SV17 173 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 CCSAPQ6IQ19 270 aaPredicted RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 PSRC1Q6PGN9 363 aaPredicted RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 SIRT2Q8IXJ6 389 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 STK11IPQ8N1F8 1099 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 CHURC1Q8WUH1 139 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 ATXN2LQ8WWM7 1075 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 MKL1Q969V6 931 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 KIFC2Q96AC6 838 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 LENG1Q96BZ8 264 aaPredicted RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 STRBPQ96SI9 672 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.352e-6■■□□□ 12.9
MACF1-221ENST00000487656 SEZ6LQ9BYH1 1024 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 UPF3AQ9H1J1 476 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 RAVER2Q9HCJ3 691 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 DNAAF2Q9NVR5 837 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 TBX21Q9UL17 535 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 SYNPO2Q9UMS6 1093 aa6.62□□□□□ -1.35
MACF1-221ENST00000487656 NOVA2Q9UNW9 492 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 RBM19Q9Y4C8 960 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 V9GY48 417 aaPredicted RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 LAMA2P24043 3122 aaKnown RBP6.62□□□□□ -1.35
MACF1-221ENST00000487656 GREB1LQ9C091 1923 aaPredicted RBP6.61□□□□□ -1.35
MACF1-221ENST00000487656 ASB14A6NK59 587 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 GSG1L2A8MUP6 293 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 PATL2C9JE40 543 aaKnown RBP6.61□□□□□ -1.35
MACF1-221ENST00000487656 ERVH48-1M5A8F1 160 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 RNF113AO15541 343 aaKnown RBP6.61□□□□□ -1.35
MACF1-221ENST00000487656 CABYRO75952 493 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 TTLL1O95922 423 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 NDUFB10O96000 172 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 ZFYP08048 801 aaPredicted RBP6.61□□□□□ -1.35
MACF1-221ENST00000487656 CSF2RAP15509 400 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 TDO2P48775 406 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 TNFAIP2Q03169 654 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 PDE4BQ07343 736 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 FOXC1Q12948 553 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 NR5A1Q13285 461 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 PTK7Q13308 1070 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 RAB30Q15771 203 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 TKFCQ3LXA3 575 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 CRTC2Q53ET0 693 aaPredicted RBP6.61□□□□□ -1.35
MACF1-221ENST00000487656 AKNAD1Q5T1N1 836 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 ZNF365Q70YC5 407 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 C16orf59Q7L2K0 433 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 ARMCX2Q7L311 632 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 CCDC144CPQ8IYA2 1237 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 RPUSD2Q8IZ73 545 aaKnown RBP6.61□□□□□ -1.35
MACF1-221ENST00000487656 KBTBD3Q8NAB2 608 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 GMCL1P1Q8NEA9 526 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 PPM1EQ8WY54 764 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 NACAP1Q9BZK3 213 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 AP5M1Q9H0R1 490 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 SLC28A3Q9HAS3 691 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 SLC38A10Q9HBR0 1119 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 IL23AQ9NPF7 189 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 ECHDC1Q9NTX5 307 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 MTMR4Q9NYA4 1195 aa6.61□□□□□ -1.35
MACF1-221ENST00000487656 ISY1Q9ULR0 285 aaKnown RBP6.61□□□□□ -1.35
MACF1-221ENST00000487656 MYADML2A6NDP7 307 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 GRXCR1A8MXD5 290 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 TMEM232C9JQI7 657 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 ADH1CP00326 375 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 CHGBP05060 677 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 TSPY3P0CV98 308 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 TSPY8P0CW00 308 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 ACRP10323 421 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 BMP3P12645 472 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 IGFBP4P22692 258 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 CYP2C18P33260 490 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 STAT2P52630 851 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 NKX3-2P78367 333 aa6.6□□□□□ -1.35
MACF1-221ENST00000487656 MRPS5P82675 430 aaKnown RBP6.6□□□□□ -1.35
MACF1-221ENST00000487656 IKQ13123 557 aaPredicted RBP6.6□□□□□ -1.35
MACF1-221ENST00000487656 ITGA7Q13683 1181 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms