RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 CXorf38Q8TB03 319 aa6.21□□□□□ -1.42
CNN3-206ENST00000487539 GATAD2BQ8WXI9 593 aa6.21□□□□□ -1.42
CNN3-206ENST00000487539 GCC1Q96CN9 775 aa6.21□□□□□ -1.42
CNN3-206ENST00000487539 GGT7Q9UJ14 662 aa6.21□□□□□ -1.42
CNN3-206ENST00000487539 ZNF541Q9H0D2 1346 aa6.21□□□□□ -1.42
CNN3-206ENST00000487539 KTN1Q86UP2 1357 aaKnown RBP6.2□□□□□ -1.42
CNN3-206ENST00000487539 MINDY4BA8MYZ0 360 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 SUV39H1O43463 412 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 CILPO75339 1184 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 RPS6KA4O75676 772 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 ADRB1P08588 477 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 HOXC9P31274 260 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 EPHX2P34913 555 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 CDK8P49336 464 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 ARMCX6Q7L4S7 300 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 C2CD5Q86YS7 1000 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 FOXQ1Q9C009 403 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 C19orf73Q9NVV2 129 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 KBTBD4Q9NVX7 518 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 GTF2IRD1Q9UHL9 959 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 CENPJQ9HC77 1338 aaPredicted RBP6.2□□□□□ -1.42
CNN3-206ENST00000487539 ADAMTS7Q9UKP4 1686 aa6.2□□□□□ -1.42
CNN3-206ENST00000487539 CARMIL3Q8ND23 1372 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 FAM221AA4D161 298 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 F6X3S4 739 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 PGRP06401 933 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 VAMP1P23763 118 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 MAP2K2P36507 400 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 ECE1P42892 770 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 ZXDCQ2QGD7 858 aaPredicted RBP6.19□□□□□ -1.42
CNN3-206ENST00000487539 BNC2Q6ZN30 1099 aaPredicted RBP6.19□□□□□ -1.42
CNN3-206ENST00000487539 MFSD2AQ8NA29 543 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 GOLM1Q8NBJ4 401 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 BACH2Q9BYV9 841 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 METTL5Q9NRN9 209 aaKnown RBP6.19□□□□□ -1.42
CNN3-206ENST00000487539 RTEL1Q9NZ71 1219 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 ADAM30Q9UKF2 790 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 SUPT16HQ9Y5B9 1047 aaKnown RBP6.19□□□□□ -1.42
CNN3-206ENST00000487539 FER1L6Q2WGJ9 1857 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 MAP3K19Q56UN5 1328 aa6.19□□□□□ -1.42
CNN3-206ENST00000487539 SBNO2Q9Y2G9 1366 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 SCN4AP35499 1836 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 AFDNP55196 1824 aaKnown RBP6.18□□□□□ -1.42
CNN3-206ENST00000487539 MKI67P46013 3256 aaKnown RBP6.18□□□□□ -1.42
CNN3-206ENST00000487539 F13A1P00488 732 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 ZNF76P36508 570 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 EIF4A3P38919 411 aaKnown RBP6.18□□□□□ -1.42
CNN3-206ENST00000487539 FAM160A1Q05DH4 1040 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 MPP2Q14168 576 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 SLBPQ14493 270 aaKnown RBP eCLIP6.18□□□□□ -1.42
CNN3-206ENST00000487539 UBE3DQ7Z6J8 389 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 MRPL41Q8IXM3 137 aaKnown RBP6.18□□□□□ -1.42
CNN3-206ENST00000487539 HEXIM2Q96MH2 286 aaKnown RBP6.18□□□□□ -1.42
CNN3-206ENST00000487539 FBRSQ9HAH7 460 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 KCNQ5Q9NR82 932 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 HACL1Q9UJ83 578 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 RNF123Q5XPI4 1314 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 KDRP35968 1356 aa6.18□□□□□ -1.42
CNN3-206ENST00000487539 CD163L1Q9NR16 1453 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 IQCA1LA6NCM1 817 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 IGF2BP3O00425 579 aaKnown RBP eCLIP6.17□□□□□ -1.42
CNN3-206ENST00000487539 CST3P01034 146 aaPredicted RBP6.17□□□□□ -1.42
CNN3-206ENST00000487539 CELA3BP08861 270 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 GDNFP39905 211 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 NKG7Q16617 165 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 SLC6A19Q695T7 634 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 ZNF746Q6NUN9 644 aaPredicted RBP6.17□□□□□ -1.42
CNN3-206ENST00000487539 OLFM4Q6UX06 510 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 DLK2Q6UY11 383 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 RGS22Q8NE09 1264 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 RAPGEF4Q8WZA2 1011 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 ZNF622Q969S3 477 aaKnown RBP eCLIP6.17□□□□□ -1.42
CNN3-206ENST00000487539 COPRSQ9NQ92 184 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 PCDH11XQ9BZA7 1347 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 PCDH11YQ9BZA8 1340 aa6.17□□□□□ -1.42
CNN3-206ENST00000487539 USP42Q9H9J4 1324 aaKnown RBP6.17□□□□□ -1.42
CNN3-206ENST00000487539 MON2Q7Z3U7 1717 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 DLEC1Q9Y238 1755 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 SLX4Q8IY92 1834 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 CACNA1SQ13698 1873 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 CA12O43570 354 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 HMGB2P26583 209 aaKnown RBP6.16□□□□□ -1.42
CNN3-206ENST00000487539 AMPHP49418 695 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 RRS1Q15050 365 aaKnown RBP6.16□□□□□ -1.42
CNN3-206ENST00000487539 CWF19L2Q2TBE0 894 aaKnown RBP6.16□□□□□ -1.42
CNN3-206ENST00000487539 LDLRAD1Q5T700 205 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 PRAMEF13Q5VWM6 474 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 REC114Q7Z4M0 266 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 SAPCD2Q86UD0 394 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 SYNE4Q8N205 404 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 TMEM87BQ96K49 555 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 MIPEPQ99797 713 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 CARS2Q9HA77 564 aaKnown RBP6.16□□□□□ -1.42
CNN3-206ENST00000487539 PRDM5Q9NQX1 630 aaPredicted RBP6.16□□□□□ -1.42
CNN3-206ENST00000487539 TMOD3Q9NYL9 352 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 MAPK8IP1Q9UQF2 711 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 COL6A3P12111 3177 aa6.16□□□□□ -1.42
CNN3-206ENST00000487539 TRPM7Q96QT4 1865 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 GNAT3A8MTJ3 354 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 SCAMP3O14828 347 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms