RNA–Protein interactions for RNA: ENST00000487309.3

RN7SL397P-201, Transcript of RNA, 7SL, cytoplasmic 397, pseudogene, humanhuman

BASIC

Gene RN7SL397P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL397P-201ENST00000487309 CHMLP26374 656 aa11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 HOXA13P31271 388 aaPredicted RBP11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 GDF6Q6KF10 455 aaPredicted RBP11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 NFRKBQ6P4R8 1299 aa11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 NSUN6Q8TEA1 469 aaKnown RBP11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 SEZ6LQ9BYH1 1024 aa11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 CNNM2Q9H8M5 875 aa11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 MRPL11Q9Y3B7 192 aaKnown RBP11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 SLC4A7Q9Y6M7 1214 aa11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 COL4A4P53420 1690 aaPredicted RBP11.13□□□□□ -0.63
RN7SL397P-201ENST00000487309 RAD50Q92878 1312 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 PALM3A6NDB9 673 aaPredicted RBP11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 GH1P01241 217 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 ZNF286BP0CG31 522 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 NT5C2P49902 561 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 HSD17B4P51659 736 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 ANTXR2P58335 489 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 GPNMBQ14956 572 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 STXBP2Q15833 593 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 BRDTQ58F21 947 aaPredicted RBP11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 ARHGEF16Q5VV41 709 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 SPRED2Q7Z698 418 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 DHX38Q92620 1227 aaKnown RBP11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 WNT8BQ93098 351 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 MPHOSPH6Q99547 160 aaKnown RBP11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 MSRAQ9UJ68 235 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 DDX41Q9UJV9 622 aaKnown RBP11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 WDFY4Q6ZS81 3184 aa11.12□□□□□ -0.63
RN7SL397P-201ENST00000487309 EPOPA6NHQ4 379 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 KPNA6O60684 536 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 NR3C2P08235 984 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 IQCF3P0C7M6 154 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 MYCLP12524 364 aaPredicted RBP11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 ATP2A2P16615 1042 aaKnown RBP11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 GHRHRQ02643 423 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 HIC1Q14526 733 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 GRM4Q14833 912 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 RAB30Q15771 203 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 CCDC85BQ15834 202 aaPredicted RBP11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 TCTN1Q2MV58 587 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 MCF2L2Q86YR7 1114 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 RPUSD2Q8IZ73 545 aaKnown RBP11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 PIBF1Q8WXW3 757 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 PIGSQ96S52 555 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 IWS1Q96ST2 819 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 GAS2L1Q99501 681 aaPredicted RBP11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 AMNQ9BXJ7 453 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 MTIF3Q9H2K0 278 aaKnown RBP11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 BCAS3Q9H6U6 928 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
RN7SL397P-201ENST00000487309 LOXHD1Q8IVV2 1947 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 B4DLN1 442 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 E7EWF7 191 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 RFXAPO00287 272 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 IFIT3O14879 490 aaKnown RBP11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 ZBTB5O15062 677 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 SGSM2O43147 1006 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 EIF3JO75822 258 aaKnown RBP11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 CA3P07451 260 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 IGFBP4P22692 258 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 MRPL12P52815 198 aaKnown RBP11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 ZNF200P98182 395 aaPredicted RBP11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 SP2Q02086 613 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 TROAPQ12815 778 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 PTGISQ16647 500 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 PPP2R2DQ66LE6 453 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 TMCO2Q7Z6W1 182 aaPredicted RBP11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 SKAP1Q86WV1 359 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 PDCD2LQ9BRP1 358 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 CERS4Q9HA82 394 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 SLC28A3Q9HAS3 691 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 HDAC6Q9UBN7 1215 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 NOD1Q9Y239 953 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
RN7SL397P-201ENST00000487309 F2P00734 622 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 PFKMP08237 780 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 UBA1P22314 1058 aaKnown RBP11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 PSEN2P49810 448 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 PTPN11Q06124 597 aaPredicted RBP11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 TRDNQ13061 729 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 PGM5Q15124 567 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 HSDL1Q3SXM5 330 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 KRT40Q6A162 431 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 TRAF7Q6Q0C0 670 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 SESTD1Q86VW0 696 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 FCHSD1Q86WN1 690 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 MB21D2Q8IYB1 491 aaPredicted RBP11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 EMID1Q96A84 441 aaPredicted RBP11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 MYL10Q9BUA6 226 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 FTOQ9C0B1 505 aaKnown RBP eCLIP11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 RIOX1Q9H6W3 641 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 GTF2IRD1Q9UHL9 959 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 TELO2Q9Y4R8 837 aa11.09□□□□□ -0.63
RN7SL397P-201ENST00000487309 PCDHA11Q9Y5I1 949 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms