RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 MAF1Q9H063 256 aa22.77■■□□□ 1.24
SMPDL3A-202ENST00000487215 DEFB103AP81534 67 aa22.76■■□□□ 1.23
SMPDL3A-202ENST00000487215 RBL2Q08999 1139 aa22.76■■□□□ 1.23
SMPDL3A-202ENST00000487215 NSUN6Q8TEA1 469 aaKnown RBP22.76■■□□□ 1.23
SMPDL3A-202ENST00000487215 HLA-CQ95604 372 aa22.76■■□□□ 1.23
SMPDL3A-202ENST00000487215 CASTP20810 708 aaKnown RBP22.75■■□□□ 1.23
SMPDL3A-202ENST00000487215 CNKSR3Q6P9H4 555 aa22.75■■□□□ 1.23
SMPDL3A-202ENST00000487215 PNMA1Q8ND90 353 aa22.75■■□□□ 1.23
SMPDL3A-202ENST00000487215 GTF2IRD1Q9UHL9 959 aa22.75■■□□□ 1.23
SMPDL3A-202ENST00000487215 TRIM6-TRIM34B2RNG4 842 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 NBNO60934 754 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 CXCL10P02778 98 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 CKBP12277 381 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 STXBP2Q15833 593 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 TCTN1Q2MV58 587 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 ADGRF4Q8IZF3 695 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 GDPD5Q8WTR4 605 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 FAM122AQ96E09 287 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 IWS1Q96ST2 819 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 RMDN3Q96TC7 470 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 ZBED2Q9BTP6 218 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 EPHX3Q9H6B9 360 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 HDAC6Q9UBN7 1215 aa22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 DDX41Q9UJV9 622 aaKnown RBP22.74■■□□□ 1.23
SMPDL3A-202ENST00000487215 PARNO95453 639 aaKnown RBP22.73■■□□□ 1.23
SMPDL3A-202ENST00000487215 DGKDQ16760 1214 aa22.73■■□□□ 1.23
SMPDL3A-202ENST00000487215 QRICH1Q2TAL8 776 aa22.73■■□□□ 1.23
SMPDL3A-202ENST00000487215 MCF2L2Q86YR7 1114 aa22.73■■□□□ 1.23
SMPDL3A-202ENST00000487215 RBAK-RBAKDNI3L0D1 243 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 ZNF213O14771 459 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 KDM4AO75164 1064 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 EIF2AK2P19525 551 aaKnown RBP22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 PSEN2P49810 448 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 RRP1P56182 461 aaKnown RBP22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 HDAC1Q13547 482 aaPredicted RBP22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 ARHGEF16Q5VV41 709 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 IQCA1Q86XH1 822 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 C7orf31Q8N865 590 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 ANKS1AQ92625 1134 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 RILPL2Q969X0 211 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 EMID1Q96A84 441 aaPredicted RBP22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 ALG1Q9BT22 464 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 KAT14Q9H8E8 782 aa22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 TRIP12Q14669 1992 aaPredicted RBP22.72■■□□□ 1.23
SMPDL3A-202ENST00000487215 ABHD14A-ACY1A0A1B0GW23 586 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 GJB5O95377 273 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 F2P00734 622 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 NT5C2P49902 561 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 MFAP1P55081 439 aaKnown RBP22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 ASPRV1Q53RT3 343 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 CCDC178Q5BJE1 867 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 FBXO11Q86XK2 927 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 CRBNQ96SW2 442 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 KATNAL1Q9BW62 490 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 LMCD1Q9NZU5 365 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 MTUS1Q9ULD2 1270 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 MRPL11Q9Y3B7 192 aaKnown RBP22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 MRVI1Q9Y6F6 885 aa22.71■■□□□ 1.23
SMPDL3A-202ENST00000487215 HAS3O00219 553 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 EIF3JO75822 258 aaKnown RBP22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 ZNF286BP0CG31 522 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 SDSP20132 328 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 PTK7Q13308 1070 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 LAMC2Q13753 1193 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 MFSD10Q14728 455 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 TRIM71Q2Q1W2 868 aaKnown RBP22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 TRAF7Q6Q0C0 670 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 PPTC7Q8NI37 304 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 WNT8BQ93098 351 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 ZSCAN10Q96SZ4 725 aaPredicted RBP22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 RAD9AQ99638 391 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 LRFN3Q9BTN0 628 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 LNPKQ9C0E8 428 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 JMJD4Q9H9V9 463 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 SUGCTQ9HAC7 445 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 PXMP2Q9NR77 195 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 LAMA4Q16363 1823 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 KIAA1217Q5T5P2 1943 aa22.7■■□□□ 1.22
SMPDL3A-202ENST00000487215 B4E1Z4 1266 aa22.69■■□□□ 1.22
SMPDL3A-202ENST00000487215 DHX16O60231 1041 aaKnown RBP22.69■■□□□ 1.22
SMPDL3A-202ENST00000487215 NR3C2P08235 984 aa22.69■■□□□ 1.22
SMPDL3A-202ENST00000487215 ERVK-21P61565 698 aa22.69■■□□□ 1.22
SMPDL3A-202ENST00000487215 KIAA0753Q2KHM9 967 aa22.69■■□□□ 1.22
SMPDL3A-202ENST00000487215 ENAHQ8N8S7 591 aaPredicted RBP22.69■■□□□ 1.22
SMPDL3A-202ENST00000487215 VAT1LQ9HCJ6 419 aa22.69■■□□□ 1.22
SMPDL3A-202ENST00000487215 LINC01553A4QN01 128 aa22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 EFCAB14O75071 495 aa22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 CFBP00751 764 aa22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 PARP1P09874 1014 aaKnown RBP22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 ZNF200P98182 395 aaPredicted RBP22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 IKBKEQ14164 716 aa22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 MBTPS1Q14703 1052 aa22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 ZNF618Q5T7W0 954 aa22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 DHX37Q8IY37 1157 aaKnown RBP22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 KHSRPQ92945 711 aaKnown RBP eCLIP22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 TGS1Q96RS0 853 aaKnown RBP22.68■■□□□ 1.22
SMPDL3A-202ENST00000487215 OPLAHO14841 1288 aa22.67■■□□□ 1.22
SMPDL3A-202ENST00000487215 FAM117BQ6P1L5 589 aa22.67■■□□□ 1.22
SMPDL3A-202ENST00000487215 HOXD8P13378 290 aaPredicted RBP22.66■■□□□ 1.22
SMPDL3A-202ENST00000487215 HSD17B4P51659 736 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms