RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 FGFR1OPO95684 399 aaKnown RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 HSPA9P38646 679 aaKnown RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 PRPHP41219 470 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 PTPROQ16827 1216 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 SLC9C1Q4G0N8 1177 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 LACTB2Q53H82 288 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 THEMIS2Q5TEJ8 643 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 TMC4Q7Z404 712 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 IGDCC4Q8TDY8 1250 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 TMX4Q9H1E5 349 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 NLRC4Q9NPP4 1024 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 INTS9Q9NV88 658 aaKnown RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 AMOTL2Q9Y2J4 779 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 GSTA1P08263 222 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 ZC3H6P61129 1189 aaKnown RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 DHX9Q08211 1270 aaKnown RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 SPRED3Q2MJR0 410 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 AKNAD1Q5T1N1 836 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 SAMD1Q6SPF0 538 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 CRELD2Q6UXH1 353 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 ADSSL1Q8N142 457 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 AGAP11Q8TF27 550 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 PACSIN2Q9UNF0 486 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 AHDC1Q5TGY3 1603 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-209ENST00000487188 MRC1P22897 1456 aa6.85□□□□□ -1.31
VPS13D-209ENST00000487188 GRID2IPA4D2P6 1211 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 RGS16O15492 202 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ORC4O43929 436 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 TOM1O60784 492 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CAND2O75155 1236 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CLSTN1O94985 981 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 PECAM1P16284 738 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CCND1P24385 295 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 SLC1A4P43007 532 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CTCFP49711 727 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 GFPT1Q06210 699 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 SCARF1Q14162 830 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 SEPT2Q15019 361 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 TSNAXIP1Q2TAA8 658 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CCDC38Q502W7 563 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 NBPF5PQ86XG9 351 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 PLBD2Q8NHP8 589 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 MDM1Q8TC05 714 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 P2RX5Q93086 422 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 TRIM7Q9C029 511 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ECT2Q9H8V3 914 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ZFATQ9P243 1243 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 MST1RQ04912 1400 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 GNAT1P11488 350 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ATP2A2P16615 1042 aaKnown RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ADD2P35612 726 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ZNF844Q08AG5 666 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 IFIT5Q13325 482 aaKnown RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 PRPF4BQ13523 1007 aaKnown RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 RAPGEF1Q13905 1077 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 DTHD1Q6ZMT9 781 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CCDC84Q86UT8 332 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 DDX42Q86XP3 938 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ZNF496Q96IT1 587 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 PURBQ96QR8 312 aaKnown RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 TLR10Q9BXR5 811 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 RNF26Q9BY78 433 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 FAM217BQ9NTX9 383 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 GGT7Q9UJ14 662 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ATP8A1Q9Y2Q0 1164 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 UTP11Q9Y3A2 253 aaKnown RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 MYH10P35580 1976 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CCDC194A0A1B0GVG4 234 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 RASSF10A6NK89 507 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 LRRC53A6NM62 1247 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 KRIT1O00522 736 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 IRF6O14896 467 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 NQO1P15559 274 aaKnown RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 TATP17735 454 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 RANBP1P43487 201 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 MAP3K12Q12852 859 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 PDIA6Q15084 440 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 TRPM8Q7Z2W7 1104 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 KCNH5Q8NCM2 988 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CCT6BQ92526 530 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 DHTKD1Q96HY7 919 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 TSG101Q99816 390 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 ARMT1Q9H993 441 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 NLRP2Q9NX02 1062 aa6.84□□□□□ -1.31
VPS13D-209ENST00000487188 CORO1CQ9ULV4 474 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-209ENST00000487188 STXBP3O00186 592 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.32
VPS13D-209ENST00000487188 PDHA1P08559 390 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 PDE6AP16499 860 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 CCNE1P24864 410 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 HSPA1LP34931 641 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 ZRSR2Q15696 482 aaKnown RBP6.84□□□□□ -1.32
VPS13D-209ENST00000487188 SFMBT2Q5VUG0 894 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 DENND2CQ68D51 928 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 NBPF10Q6P3W6 841 aaKnown RBP6.84□□□□□ -1.32
VPS13D-209ENST00000487188 ZNF572Q7Z3I7 529 aaPredicted RBP6.84□□□□□ -1.32
VPS13D-209ENST00000487188 RNF10Q8N5U6 811 aaKnown RBP6.84□□□□□ -1.32
VPS13D-209ENST00000487188 MGARPQ8TDB4 240 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.84□□□□□ -1.321e-9■■■■■ 80.2
VPS13D-209ENST00000487188 AP1M1Q9BXS5 423 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms