RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
FDPS-212ENST00000487002 ZBED6P86452 979 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 TCP10Q12799 353 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 ZNF772Q68DY9 489 aaPredicted RBP18.88■□□□□ 0.61
FDPS-212ENST00000487002 CEP112Q8N8E3 955 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 KCNMB3Q9NPA1 279 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 MARCH6O60337 910 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 CACNB3P54284 484 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 CDK17Q00537 523 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 CC2D2BQ6DHV5 1058 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 DDX12PQ92771 950 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 NUDT12Q9BQG2 462 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 SLF1Q9BQI6 1058 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 ANO3Q9BYT9 981 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 HAUS4Q9H6D7 363 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 ZNHIT6Q9NWK9 470 aaKnown RBP18.88■□□□□ 0.61
FDPS-212ENST00000487002 ZNF446Q9NWS9 450 aa18.88■□□□□ 0.61
FDPS-212ENST00000487002 A0A0U1RQJ8 604 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 WDR59Q6PJI9 974 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 SRGAP1Q7Z6B7 1085 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 TEX2Q8IWB9 1127 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 SLFN12Q8IYM2 578 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 CCDC170Q8IYT3 715 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 KRT222Q8N1A0 295 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 ATRIPQ8WXE1 791 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 CHP1Q99653 195 aa18.87■□□□□ 0.61
FDPS-212ENST00000487002 NAPGQ99747 312 aaPredicted RBP18.87■□□□□ 0.61
FDPS-212ENST00000487002 KRT83P78385 493 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 BMS1Q14692 1282 aaKnown RBP18.86■□□□□ 0.61
FDPS-212ENST00000487002 ABCB5Q2M3G0 1257 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 DYMQ7RTS9 669 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 KCNK18Q7Z418 384 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 SIAH1Q8IUQ4 282 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 SLC35F6Q8N357 371 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 SUPT20HQ8NEM7 779 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 CRYGNQ8WXF5 182 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 TSG101Q99816 390 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 AMNQ9BXJ7 453 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 BMP2KQ9NSY1 1161 aaPredicted RBP18.86■□□□□ 0.61
FDPS-212ENST00000487002 PCDHAC2Q9Y5I4 1007 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 CYLC1P35663 651 aaPredicted RBP18.86■□□□□ 0.61
FDPS-212ENST00000487002 MAN2A1Q16706 1144 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 TMCO3Q6UWJ1 677 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 HPS3Q969F9 1004 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 DNAJC19Q96DA6 116 aa18.86■□□□□ 0.61
FDPS-212ENST00000487002 REXO2Q9Y3B8 237 aaKnown RBP18.86■□□□□ 0.61
FDPS-212ENST00000487002 FAM196BA6NMK8 535 aa18.85■□□□□ 0.61
FDPS-212ENST00000487002 TBX3O15119 743 aa18.85■□□□□ 0.61
FDPS-212ENST00000487002 ATP8B1O43520 1251 aa18.85■□□□□ 0.61
FDPS-212ENST00000487002 KIF4BQ2VIQ3 1234 aa18.85■□□□□ 0.61
FDPS-212ENST00000487002 VWA3BQ502W6 1294 aa18.85■□□□□ 0.61
FDPS-212ENST00000487002 EHBP1Q8NDI1 1231 aa18.85■□□□□ 0.61
FDPS-212ENST00000487002 STK24Q9Y6E0 443 aa18.85■□□□□ 0.61
FDPS-212ENST00000487002 RASSF10A6NK89 507 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L15C9J2P7 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L13C9JLJ4 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L11C9JVI0 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L18D6R9N7 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L22D6RA61 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L17D6RBQ6 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L19D6RCP7 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L20D6RJB6 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 F5H6K3 240 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 FOSP01100 380 aaPredicted RBP18.84■□□□□ 0.61
FDPS-212ENST00000487002 IDEP14735 1019 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 MMP14P50281 582 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 CHMP4BP1P59074 171 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 KLRC3Q07444 240 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L24Q0WX57 530 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 COASYQ13057 564 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 WHAMMP3Q1A5X7 153 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 USP17L6PQ6QN14 398 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 LRRC55Q6ZSA7 311 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 CCDC84Q86UT8 332 aaPredicted RBP18.84■□□□□ 0.61
FDPS-212ENST00000487002 C7orf43Q8WVR3 580 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 EIF3CLB5ME19 914 aaKnown RBP18.84■□□□□ 0.61
FDPS-212ENST00000487002 MEIS2O14770 477 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 ZRANB2O95218 330 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■□□□□ 8.1
FDPS-212ENST00000487002 SLURP2P0DP57 97 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 HNRNPH3P31942 346 aaKnown RBP18.84■□□□□ 0.61
FDPS-212ENST00000487002 ECM1Q16610 540 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 TEX35Q5T0J7 233 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 HAUS3Q68CZ6 603 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 BTNL9Q6UXG8 535 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 MYOCDQ8IZQ8 938 aa18.84■□□□□ 0.61
FDPS-212ENST00000487002 EIF3CQ99613 913 aaKnown RBP18.84■□□□□ 0.61
FDPS-212ENST00000487002 POTEB2H3BUK9 544 aa18.83■□□□□ 0.61
FDPS-212ENST00000487002 PSMD14O00487 310 aa18.83■□□□□ 0.61
FDPS-212ENST00000487002 Q4G0T1 1027 aa18.83■□□□□ 0.61
FDPS-212ENST00000487002 SYDE2Q5VT97 1194 aa18.83■□□□□ 0.61
FDPS-212ENST00000487002 ARHGAP27Q6ZUM4 889 aa18.83■□□□□ 0.61
FDPS-212ENST00000487002 NDST4Q9H3R1 872 aa18.83■□□□□ 0.61
FDPS-212ENST00000487002 AGPAT5Q9NUQ2 364 aa18.83■□□□□ 0.61
FDPS-212ENST00000487002 RAD21O60216 631 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 KIF20AO95235 890 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 IPO7O95373 1038 aaKnown RBP18.83■□□□□ 0.6
FDPS-212ENST00000487002 NDUFB10O96000 172 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 HERVK_113P62684 666 aa18.83■□□□□ 0.6
FDPS-212ENST00000487002 ARHGAP4P98171 946 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms