RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 ROBO3Q96MS0 1386 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 TNRC6CQ9HCJ0 1690 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 SMTNL1A8MU46 457 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 DYNC1I1O14576 645 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 WDHD1O75717 1129 aaPredicted RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 ZNF202O95125 648 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 BMP15O95972 392 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 RXRAP19793 462 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 HMGB2P26583 209 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 NOS3P29474 1203 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 HIBADHP31937 336 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 GTF2F1P35269 517 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 SYKP43405 635 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 IREB2P48200 963 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 NLRP12P59046 1061 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 TPM4P67936 248 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 BTLAQ7Z6A9 289 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 IQCA1Q86XH1 822 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 DIS3L2Q8IYB7 885 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 FAM177A1Q8N128 213 aaPredicted RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 ZNF384Q8TF68 577 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 AIFM3Q96NN9 605 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 CRNKL1Q9BZJ0 848 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 IMPACTQ9P2X3 320 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 CLIP2Q9UDT6 1046 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 HOOK1Q9UJC3 728 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 CCNL1Q9UK58 526 aaPredicted RBP8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 LEMD3Q9Y2U8 911 aa8.09□□□□□ -1.11
SMARCAL1-212ENST00000486983 TAF1LQ8IZX4 1826 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 PRPF3O43395 683 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 RGS9O75916 674 aaPredicted RBP8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 TM4SF1P30408 202 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 GSDMDP57764 484 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 MECOMQ03112 1051 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 GRAPQ13588 217 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCDC178Q5BJE1 867 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 RRP12Q5JTH9 1297 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 IFIT1BQ5T764 474 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 CTR9Q6PD62 1173 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 SHC4Q6S5L8 630 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 CATIPQ7Z7H3 387 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 ENAHQ8N8S7 591 aaPredicted RBP8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 GRAPLQ8TC17 118 aaPredicted RBP8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 SDR42E1Q8WUS8 393 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 MEGF10Q96KG7 1140 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 MYL10Q9BUA6 226 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 ALG2Q9H553 416 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 TOMM22Q9NS69 142 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 KCND1Q9NSA2 647 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 GJB4Q9NTQ9 266 aa8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 R3HCC1Q9Y3T6 440 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-212ENST00000486983 MINDY4BA8MYZ0 360 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 RRP9O43818 475 aaKnown RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 PTGS1P23219 599 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 KCNJ6P48051 423 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 GSTO1P78417 241 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 AKAP17AQ02040 695 aaKnown RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 TROAPQ12815 778 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 EZH2Q15910 746 aaKnown RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 DPCR1Q3MIW9 517 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 CT47A1Q5JQC4 288 aaPredicted RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 NT5DC1Q5TFE4 455 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 MSL1Q68DK7 614 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 TMTC3Q6ZXV5 915 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCDC186Q7Z3E2 898 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 MTERF4Q7Z6M4 381 aaKnown RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 DRC7Q8IY82 874 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCDC144CPQ8IYA2 1237 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 AOPEPQ8N6M6 819 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 SPC24Q8NBT2 197 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 MYRIPQ8NFW9 859 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 WDR66Q8TBY9 1149 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 ZNF830Q96NB3 372 aaPredicted RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 MAP7D2Q96T17 732 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 PHF20Q9BVI0 1012 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 GSX2Q9BZM3 304 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 OSBPL5Q9H0X9 879 aaPredicted RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 BRMS1Q9HCU9 246 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 DCP1AQ9NPI6 582 aaPredicted RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 INCENPQ9NQS7 918 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 FAM13BQ9NYF5 915 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 SRP68Q9UHB9 627 aaKnown RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 FBXO2Q9UK22 296 aaPredicted RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 PYCARDQ9ULZ3 195 aa8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 SRPRBQ9Y5M8 271 aaKnown RBP8.07□□□□□ -1.12
SMARCAL1-212ENST00000486983 XDHP47989 1333 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 UQCRHLA0A096LP55 91 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 BTBD18B2RXH4 712 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 TRIM37O94972 964 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 UQCRHP07919 91 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 NFKB1P19838 968 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 MARCKSP29966 332 aaPredicted RBP8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 GUCY1A2P33402 732 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 KRT2P35908 639 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 TRAPPC10P48553 1259 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 TOB1P50616 345 aaPredicted RBP8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 DYNLL1P63167 89 aaKnown RBP8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 CLDN10P78369 228 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 MYL5Q02045 173 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms